Query= MSMg01no059_k07.b1 MSMg01no059_k07.b1 CHROMAT_FILE:
MSMg01no059_k07.b1 PHD_FILE: MSMg01no059_k07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:02:12 2005
(294 letters)
>mm_chr12_52607266_52607959
Length = 694
Score = 530 bits (274), Expect = e-155
Identities = 283/286 (98%), Gaps = 1/286 (0%)
Strand = Plus / Minus
Query: 4 ggaattcccaagaggaccgcaccatgacttccagttcttgacaagcacttcatagagata 63
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ggaattcccaagaggaaagcaccatgacttccagttcttgacaagcacttcatagagata 430
Query: 64 gacagagggatgctcatctccctcctgtagaaaagagcaaagtagctgggagaagcccag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gacagagggatgctcatctccctcctgtagaaaagagcaaagtagctgggagaagcccag 370
Query: 124 cgaggggaattcatagtggcccgtgcgcgggaaccaccagctcagaatgctgtaccgtgt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 cgaggggaattcatagtggcccgtgcgcgggaaccaccagctcagaatgctgtaccgtgt 310
Query: 184 gggggacttctgatgaattcaatccagttggcttacctgagaggaacatatactttgttt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gggggacttctgatgaattcaatccagttggcttacctgagaggaacatatactttgttt 250
Query: 244 caggttgatgtaggttttgaagcttctggggctgggggggtggggg 289
|||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 249 caggttgatgtaggttttgaagcttctggggctggggggg-ggggg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no059_k07.g1 MSMg01no059_k07.g1 CHROMAT_FILE:
MSMg01no059_k07.g1 PHD_FILE: MSMg01no059_k07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:02:12 2005
(491 letters)
>mm_chr12_52448802_52449692
Length = 891
Score = 866 bits (448), Expect = 0.0
Identities = 477/492 (96%), Gaps = 11/492 (2%)
Strand = Plus / Plus
Query: 1 ccttcgcgcgccttctcattagcatgggcaagcctcctcccagcgtgtggcctgttgggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccttcgcgcgccttctcattagcatgggcaagcctcctcccagcgtgtggcctgttgggg 260
Query: 61 ggtgactggtgcgctccgcacgcctccgcggacgtgcaggaccgggagttgttttcct-g 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 261 ggtgactggtgcgctccgcacgcctccgcggacgtgcaggaccgggagttgttttcctgg 320
Query: 120 ccggggtccgcgcagccacccctgcgcgcacgcccgatcttcattcccacccccaccccc 179
|| |||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 321 cc-gggtccgcgcagccacccctgcgcgcacgcccgaacttcattcccaccccc------ 373
Query: 180 ccaaccccgaaagccaaggcgcagacgcagcctccctgcgtccacttccccggggagggg 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ---accccgaaagccaaggcgcagacgcagcctccctgcgtccacttccccggggagggg 430
Query: 240 ccgagcagccgtgggttccgggtcgcaaacggaagtggacgacgaatttgaattgtgcga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ccgagcagccgtgggttccgggtcgcaaacggaagtggacgacgaatttgaattgtgcga 490
Query: 300 gccgttggatggggctgagcgggttgggcgtacggcagcgctgcggtcgacgtgagcggt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 gccgttggatggggctgagcgggttgggcgtacggcagcgctgcggtcgacgtgagcggt 550
Query: 360 aacgcggcgagcctgggacttgtgccccgcgcctggtgaagacgtgcccggggacggacg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 551 aacgcggcgagcctgggacttgtgccccgcgcctggtgaagacgtgcccggggacagacg 610
Query: 420 gaggtgtcacgggcggccgggtaggtgtgagcggtaggaggcttctccacgcgctggacg 479
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 611 gaggtgtcacgggcggccgggtaggtgtgagcggtagggggcttctccacgcgctggacg 670
Query: 480 tgcgcgccctgc 491
| ||||||||||
Sbjct: 671 tccgcgccctgc 682
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 491
Length of database: 891
Length adjustment: 10
Effective length of query: 481
Effective length of database: 881
Effective search space: 423761
Effective search space used: 423761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
