XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCA
ACTCCCGCACAATAGCCATTCAGGCTGGGGGATTCCTCTTTGGTATAGAG
GGGCTGTCTCATAGAACACCAAGTCCCAAGCCCCTCCCCACGGCCTACTA
GGTATCAGCAGCATCTTTTAAGCTACGACAACTAGCAAGAATCTCCAGAG
ATTACCAAGTGTTCCAGAAATAAAAACTCTGCTTGGTTGAAACATCAACT
CTTCTTCATGCAGATCTCTACACAATGTGAGCCCTGCTGTCAAATCTGGC
TGGGGCCACTTAGGGACACCAAAATAGGAAAAAGAGATTAAAGCGTCTAC
TTAGCAGTTAAAAGCACTTGCCGCTTTTCTAGAGCACCTGGGTTCTGTTC
CCAGCGCCCACACTGGGCAGCTCACAATTCCTTGTGACTAGTTTTAGGGA
ATCCAATTCCCTCTTCTGGCCTCCACAGGTACTGTAGGCATGTAGTGTGC
ATATAAACAGGTAGGTATCTACACACACACATGAATAAAATAGAAAATTA
AAAGGAACATGTCCCAAAAGCATGCAGAACCCTGAATTTATAAAAGACAT
TTTGTCTAGAATGAGCCAGCCACTCATGTTAGAGAGCAATAAGGGGTGGA
GGTGGAGGGGCGGAGGTATTCCCTCTCCGTTTTTATTCTTTTTCGCCTCC
CCCCCACACACCCCTTTTCT

TCGATGCAGCGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTTTCCTTTGTTTGTGTTAGGGCTTTGCTT
AGTTGGTTGGTTAGCTGCTTGGTTGGTTAACTGGTTAGCTGGTTGCTTGC
TTGGTCGGCTGCCTGGTTAGCTGCTTGGTTCGCCTCACTCCCTCCTTCCT
TTCTCTACTCTCCCTCCCCTTCCCTCCTCCTCCTCCTCTCCACTCCCCCC
TTCTCCCCTCTTACTCTACCCCCAAATGAAATGGACAAACGCAAAACCGC
ATTTTTTGTTTAAACACCCCTCTTTTTTTTTCCCCCCCTATTCCTACTTT
TTTCCCCCCTTCCCCCTTTTCTCCCACCCCCTCCCCCCATAAAATCTAAC
CCACCGCCACACGCAATTCCGCCATTTTCCCCCCCCCTATACCACCCCCC
CATTCTTTTTCTTTTCCCCCCTTCCCCACCCCCCTTTCCCCCCTTTTCCC
TTACCTTTCCTCACCTTTTACACACTTTCCCCCTCCCCCCCTCTCCCCTA
TTTATTTTTCTTCTTCATTCCTTCCCCTTCTCTATCTACCCACCCCCTCC
CTCCTTATTTTTCTCCCACCTCCCTTCCCATACCATCCCCCCCCTTCTCT
CATATATTCCCACCTCCATCCCCTTCCTCCCCCCTATATATCCCCATTCC
CTATTTTCCCCCATTTATACTGTTGCACAAAAACAAACAAGGTGGAAACA
AATCGCCAAAATAACTACCGCCTATCAAAAAAAACCCTGCTCCATCTTTC
TCCCCCTTTTTTTTTTACTTT

Query= MSMg01no060_b21.b1 MSMg01no060_b21.b1 CHROMAT_FILE:
MSMg01no060_b21.b1 PHD_FILE: MSMg01no060_b21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:02:46 2005
         (530 letters)



>mm_chr12_84216166_84217095
          Length = 930

 Score =  884 bits (457), Expect = 0.0
 Identities = 484/495 (97%), Gaps = 6/495 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctcaactcccgcacaatagccattcaggctgggggattcctctttggtatagagg 64
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 gaattctcaactccagcacaatagccattcaggctgggggattcctctttggtatagagg 658

                                                                       
Query: 65  ggctgtctc----atagaacaccaagtcccaagcccctccccacggcctactaggtatca 120
           |||||||||    |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 ggctgtctcatagatagaacaccaagtcccaagcccctccccacggcctactaggtatca 598

                                                                       
Query: 121 gcagcatcttttaagctacgacaactagcaaga-atctccagagattaccaagtgttcca 179
           ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 597 gcagcatcttttaagctacgacaactagcaa-atatctccagagattaccaagtgttcca 539

                                                                       
Query: 180 gaaataaaaactctgcttggttgaaacatcaactcttcttcatgcagatctctacacaat 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 538 gaaataaaaactctgcttggttgaaacatcaactcttcttcatgcagatctctacacaac 479

                                                                       
Query: 240 gtgagccctgctgtcaaatctggctggggccacttagggacaccaaaataggaaaaagag 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 gtgagccctgctgtcaaatctggctggggccacttagggacaccaaaataggaaaaagag 419

                                                                       
Query: 300 attaaagcgtctacttagcagttaaaagcacttgccgcttttctagagcacctgggttct 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 attaaagcgtctacttagcagttaaaagcacttgccgcttttctagagcacctgggttct 359

                                                                       
Query: 360 gttcccagcgcccacactgggcagctcacaattccttgtgactagttttagggaatccaa 419
           |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gttcccagcgtccacactggccagctcacaattccttgtgactagttttagggaatccaa 299

                                                                       
Query: 420 ttccctcttctggcctccacaggtactgtaggcatgtagtgtgcatataaacaggtaggt 479
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 298 ttccctcttctggcctccacaggtactgtaggcatgtggtgtgcatataaacaggtaggt 239

                          
Query: 480 atctacacacacaca 494
           |||||||||||||||
Sbjct: 238 atctacacacacaca 224


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 930
Length adjustment: 10
Effective length of query: 520
Effective length of database: 920
Effective search space:   478400
Effective search space used:   478400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)