Query= MSMg01no060_e19.b1 MSMg01no060_e19.b1 CHROMAT_FILE:
MSMg01no060_e19.b1 PHD_FILE: MSMg01no060_e19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:03:00 2005
(373 letters)
>mm_chr12_109460154_109460926
Length = 773
Score = 534 bits (276), Expect = e-156
Identities = 344/368 (93%), Gaps = 8/368 (2%)
Strand = Plus / Plus
Query: 7 gaattcaaattctgc--caaccacatggtggctcacaaccatctctcatgagatctgact 64
|||||||||| | | ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcaaatcc--cagcaaccacgtggtggctcacaaccatctctcatgagatctgacg 264
Query: 65 tcctcttctggggtgtttgaagacagctacagtatacttacatataataaataaatg-t- 122
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 265 tcctcttctggggtgtttgaagacagctacagtgtacttacatataataaataaatggtg 324
Query: 123 tttgttttgtttgtttgtttttttaaaaagaacatgtctggaaatgcctttgtgactgac 182
||| |||||||||||||||||| ||||||| | ||||||| ||||||||||||||||
Sbjct: 325 ttt-ttttgtttgtttgttttta-aaaaagagcctgtctgggtgtgcctttgtgactgac 382
Query: 183 atgcagacagcaactgaggtggaaagaccctccctgaatgtgaacaaggtcatgcaacag 242
| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 acacaaacagcaactgaggtggaaagaccctccctgaatgtgaacaaggtcatgcaacag 442
Query: 243 gcgaagggcttagggcttcgagaggggaaaaaaaaagcccatcaccctaggctctgtgct 302
||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 443 gcgaagggcttagggcttccagagggggaaaaaaaagcccaccaccctaggctctgtgct 502
Query: 303 ccctcccccgcccccacctccttttccacccccaaagaggacacgtgtgaggagttcctc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ccctcccccgcccccacctccttttccacccccaaagaggacacgtgtgaggagttcctc 562
Query: 363 aatcgcca 370
||||||||
Sbjct: 563 aatcgcca 570
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 773
Length adjustment: 9
Effective length of query: 364
Effective length of database: 764
Effective search space: 278096
Effective search space used: 278096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no060_e19.g1 MSMg01no060_e19.g1 CHROMAT_FILE:
MSMg01no060_e19.g1 PHD_FILE: MSMg01no060_e19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:03:00 2005
(333 letters)
>mm_chr12_109615198_109615929
Length = 732
Score = 569 bits (294), Expect = e-166
Identities = 324/334 (97%), Gaps = 3/334 (0%)
Strand = Plus / Minus
Query: 1 attcatatgttgctaagagttaagatcatgtgtgaggcccacactgagcctgtatgagcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 attcatatgttgctaagagttaagatcatgtgtgaggcccacactgagcctgtatgagcc 473
Query: 61 ctacacatggtg-ggagagggcacacacacacagttatttgtggctaacctgagggattt 119
|||||||||| | || |||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 472 ctacacatggcgagg-gagggcacacgcacgcagttatttgtggctaacctgagggattt 414
Query: 120 gggaccagtgagtgtcaaatacaacacataacttaccctgaacccagaaagagaaagagg 179
|||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||
Sbjct: 413 gggaccagtgagtgtcaaatacaacacataacttaccc-gaatccagaaggagaaagagg 355
Query: 180 cctacgccagaacgcaggataatgagggcgccagttgtccccaaacacccaatacctcag 239
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 354 cctacgccagaacgcaggataatgagggcgtcagttgtccccaaacacccaatacctcag 295
Query: 240 cactcccacaaggggcatgaaacacaggacaggctgggctggcattcttcaggaatactg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 cactcccacaaggggcatgaaacacaggacaggctgggctggcattcttcaggaatactg 235
Query: 300 cccagagagatagcaggaggtagaggggtgctcc 333
||||| ||||||||||||||||||||||||||||
Sbjct: 234 cccagtgagatagcaggaggtagaggggtgctcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 732
Length adjustment: 9
Effective length of query: 324
Effective length of database: 723
Effective search space: 234252
Effective search space used: 234252
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
