TTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTCGATTT
TCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCC
TATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTT
TTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCAT
TAGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTC
TGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCACT
TTCTCCTCTATAAATTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGAT
CCACTTAGATTTGACCCACCATCCATCCTGACCAAGTAGGTTTTATTCCA
GGGATGCAGGGATGGTTTAATATACGAAAATCCATCAATGTAATCCATTA
TATAAACAAACTCAAAGACAACAACCACATGATCATCTCGTTAAATGCAG
AAAAAGCATTTGACAAGATCCAACACCCATTCATGATAAAAGTTTTGGAA
AGATCAGGAATTCAAGGCCCATACCTAAACATGATAAAAGCAATCTACAG
CAAACCAGTAGCCAACTCCCAGTAAATGGAGAGAAGCTGGAAGCATCCCA
CTAAAACAGGGACTAGAT

ACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCACCTGTGATAGCAGCCTTCTTGGAATGA
CATCTAAATATGCACTCAGGAAAAAGTGGGGGCTACCTAGCAAAGTAAAC
AATGGTCTCTTAGGGTTTTTTTGGGTTCTCTGCCCACAAACGCTGAGCAC
ATATCCCTGCTCACTCATCCTGGAGTGGCTCTGAGAAAGTGTAGTGAAGA
AAGCAGAGGTTGGGACAGAGAAGGCTTCTTCAGAACATCAGAAGATCTTT
TTCCCACTTTGTGATGGATAGAATTCAGAAAGGGCTTTGTTGTATTCCCG
TGCTAGGGGACTGACAACATATGACTTTGCTACACTTCAGCAGATGAGTA
GGACTCTAAACTCAGCAGGGAGGGAGACAATCCGCTCTTCTCTCAGTCTC
CCTTCACTACTGCAGCCGCCTGTCTTTTGATGCAGATTCAGGAAGTTCTT
ACTTTGGTGGTGTCCTGGAAAAAATAACTATTTTTAAAAGGCACTTCAGT
CCCTTCATTTTTAAATATTATTTTTTCTTTTGTTGAAAAACAGGTTCTTT
TCTCATACAACATATCCTGATTATAGTTTCCTTTTCCTCTCCTACTCCAA
CTTCCTCCCCACCTCCCATCTGCTCCAGATCTACTATCTTTCTGTATCTC
ATTAGAAAAGAACAGGCTTAAAGAAGAACTGCTATAGACATGTAGA

Query= MSMg01no061_b13.g1 MSMg01no061_b13.g1 CHROMAT_FILE:
MSMg01no061_b13.g1 PHD_FILE: MSMg01no061_b13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:03:59 2005
         (634 letters)



>mm_chr12_59375514_59376548
          Length = 1035

 Score = 1174 bits (607), Expect = 0.0
 Identities = 628/635 (98%), Gaps = 1/635 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   cacctgtgatagcagccttcttggaatgacatctaaatatgcactcaggaaaaagtgggg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacctgtgatagcagccttcttggaatgacatctaaatatgcactcaggaaaaagtgggg 260

                                                                       
Query: 61  gctacctagcaaagtaaacaatggtctcttaggg-tttttttgggttctctgcccacaaa 119
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 gctacctagcaaagtaaacaatggtctcttaggggtttttttgggttctctgcccacaaa 320

                                                                       
Query: 120 cgctgagcacatatccctgctcactcatcctggagtggctctgagaaagtgtagtgaaga 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cgctgagcacatatccctgctcactcatcctggagtggctctgagaaagtgtagtgaaga 380

                                                                       
Query: 180 aagcagaggttgggacagagaaggcttcttcagaacatcagaagatctttttcccacttt 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagcagaggttgggacagagaaggcttcttcagaacatcagaagatctttttcccacttt 440

                                                                       
Query: 240 gtgatggatagaattcagaaagggctttgttgtattcccgtgctaggggactgacaacat 299
           |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 441 gtgatggagagaattcagaaagggctttgttgtattcctgtgctaggggactgacaacat 500

                                                                       
Query: 300 atgactttgctacacttcagcagatgagtaggactctaaactcagcagggagggagacaa 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgactttgctacacttcagcagatgagtaggactctaaactcagcagggagggagacaa 560

                                                                       
Query: 360 tccgctcttctctcagtctcccttcactactgcagccgcctgtcttttgatgcagattca 419
           |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tccgctcttctctctgcctcccttcactactgcagccgcctgtcttttgatgcagattca 620

                                                                       
Query: 420 ggaagttcttactttggtggtgtcctggaaaaaataactatttttaaaaggcacttcagt 479
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gggagttcttactttggtggtgtcctggaaaaaataactatttttaaaaggcacttcagt 680

                                                                       
Query: 480 cccttcatttttaaatattattttttcttttgttgaaaaacaggttcttttctcatacaa 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cccttcatttttaaatattattttttcttttgttgaaaaacaggttcttttctcatacaa 740

                                                                       
Query: 540 catatcctgattatagtttccttttcctctcctactccaacttcctccccacctcccatc 599
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 741 catatcctgattatagtttccttttcctctcctcctccaacttcctccccacctcccatc 800

                                              
Query: 600 tgctccagatctactatctttctgtatctcattag 634
           |||||||||||||||||||||||||||||||||||
Sbjct: 801 tgctccagatctactatctttctgtatctcattag 835


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1035
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1025
Effective search space:   639600
Effective search space used:   639600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)