CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTTATTCTTATGCTTATCTCTTCTCTTCTCTCCTTCGCTTGCACCATT
TTCACTTAGTTCTGTTTCCCAAATATTTTTCACTATTTAATGTTTTCCAT
GTTTCACTCCTTTCTTTCTCCTATCCCCTCAGCTAACATGTTCACCCCTC
TAATGGTTCCAGTTTCATGACCTATACGCAAAAACATTCAATAAAATATT
TATTGTTATTTTCATGTGTGTGTGTGTAAATTCATGTACATAGCCATGTG
GATATGGGTAACTGCAGAGACCAAAAGAGGATAATACATTCCCATGGTGT
GAAGTTATGGGAACTTTACAGCCACTAAGTATGGGTATTAGAAACTCAAC
TTGTTTTTTACTTCCCTGCAAGAACATGTGCCTTTAACCACAAAGCCATC
TGTCAGGTTACACACACACACACACACACACACACACACACACACACACA
CACACACACTCACACACACAAGCACACACACATTCAAATAAAGTTCAACT
ATATGAGAGAAAACATACAGTGTTTGTAGCTTTCATTCTGTCTTATTACT
GAATAAAGTCTGCTGCACATATGTAGAACATTTTTCTTATCTATTCATCT
GTGAACATGTCTCTGGTTTCATTT

GAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCAGGAACTGAAAACTGGAGAAGCCAG
AATTTAGATACCTAGGGTAGACCAAAAAATGTTTGGTCTTTAAAAAAGGA
TGGGAGGGGCGATATCAGTGAAATGAGTTCTAATGATATTCTGCTATACT
TATAGATCAGTGTCTTGTCCAGTTATCAGAGAGTCTTTCTCCTGTAGCAC
ACAGGAGCTGATACAGAGACTAGTAGTCAGATATGTGAGAGAGAGGGGGA
GAGGGAGGGAGGAANCCCTTCTTTCTTTTCCCCCCTTCCTCCCCTCTTCC
TGCGCCTCCTTTTTTCCTTCCCCCCCCCCCCTCCGCTTTCCTTCCCTCCT
TTCGGTCCGTTCCTACGCGCCTATACTAAATCCCATTTGGTGGCGCGGCA
GCCTATCCACCCGCAATACGTGTTCGAAATGCCCGCGAGTCCAAAACTAC
TCACCACGCACACTGCTCGAGATTCTTATTCTCCGCTCTTCTTGCTCTCC
TCCGGCTCTAGGAATACAGTTCGTTCCTCTCGTTTATATTCTCTTCTCTT
CGCCTGTCGTCTTCATGTGCTTTTCTTTTTTCCCTCCCTTCTCTTTTTTC
AGCCCGTTGTTTCTCTCTTTATCCGGCTCTCCTATTTATGTGCTCCCCAC
TTCATCATTC

Query= MSMg01no063_e19.b1 MSMg01no063_e19.b1 CHROMAT_FILE:
MSMg01no063_e19.b1 PHD_FILE: MSMg01no063_e19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:36 2005
         (452 letters)



>mm_chr12_43816235_43817081
          Length = 847

 Score =  743 bits (384), Expect = 0.0
 Identities = 403/412 (97%), Gaps = 5/412 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcttattcttatgcttatctcttctcttctctccttcgcttgcaccattttcactt 64
           |||||||||||||||||||||     ||||||||||||||||||||||||||||||||||
Sbjct: 407 gaattcttattcttatgctta-----tctcttctctccttcgcttgcaccattttcactt 353

                                                                       
Query: 65  agttctgtttcccaaatatttttcactatttaatgttttccatgtttcactcctttcttt 124
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 352 agttctgtttcccaaatatttttcactatttaatgttttccatatttcactcctttcttt 293

                                                                       
Query: 125 ctcctatcccctcagctaacatgttcacccctctaatggttccagtttcatgacctatac 184
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 gtcctatcccctcagctaacatgttcacccctctaatggttccagtttcatgacctatac 233

                                                                       
Query: 185 gcaaaaacattcaataaaatatttattgttattttcatgtgtgtgtgtgtaaattcatgt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 gcaaaaacattcaataaaatatttattgttattttcatgtgtgtgtgtgtaaattcatgt 173

                                                                       
Query: 245 acatagccatgtggatatgggtaactgcagagaccaaaagaggataatacattcccatgg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 acatagccatgtggatatgggtaactgcagagaccaaaagaggataatacattcccatgg 113

                                                                       
Query: 305 tgtgaagttatgggaactttacagccactaagtatgggtattagaaactcaacttgtttt 364
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 112 tgtgaagttatgggaactttagagccactaagtatgggtattagaaactcaacttgtttt 53

                                                               
Query: 365 ttacttccctgcaagaacatgtgcctttaaccacaaagccatctgtcaggtt 416
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 52  ttacttccctgcaaggacatgtgcctttaaccacaaagccatctgtcaggtt 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 847
Length adjustment: 10
Effective length of query: 442
Effective length of database: 837
Effective search space:   369954
Effective search space used:   369954
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)