Query= MSMg01no063_g07.b1 MSMg01no063_g07.b1 CHROMAT_FILE:
MSMg01no063_g07.b1 PHD_FILE: MSMg01no063_g07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:44 2005
(128 letters)
>mm_chr12_33789163_33789691
Length = 529
Score = 226 bits (117), Expect = 3e-64
Identities = 126/129 (97%), Gaps = 1/129 (0%)
Strand = Plus / Plus
Query: 1 gcttgcaa-atcaacccctcttcatcactggcctcaaggagggggttcccattcctgctt 59
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 gcttgcaacatcaacccctcttcatcactggcctcaaggagggggttcccattccagctt 260
Query: 60 gcttccctgtgctccagaactcctacaggtaagtctacatttcctgatccactcttcagg 119
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 gcttccctgtgctccagaactcctacaggtaagtctacatttcctgatccacccttcagg 320
Query: 120 tgcacagga 128
|||||||||
Sbjct: 321 tgcacagga 329
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 128
Length of database: 529
Length adjustment: 8
Effective length of query: 120
Effective length of database: 521
Effective search space: 62520
Effective search space used: 62520
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no063_g07.g1 MSMg01no063_g07.g1 CHROMAT_FILE:
MSMg01no063_g07.g1 PHD_FILE: MSMg01no063_g07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:44 2005
(171 letters)
>mm_chr12_33938750_33939320
Length = 571
Score = 323 bits (167), Expect = 4e-93
Identities = 170/171 (99%)
Strand = Plus / Minus
Query: 1 aatataaaaagaaaagaaaaaaagaaaaagaaaaaaagtgcatcactcaaggtgcttttc 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 aataaaaaaagaaaagaaaaaaagaaaaagaaaaaaagtgcatcactcaaggtgcttttc 349
Query: 61 aaattcaataggataccgaaattattttcaaatttttattacaggattagtgatgtgggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 aaattcaataggataccgaaattattttcaaatttttattacaggattagtgatgtgggc 289
Query: 121 aagaaagaccctaaaacaaccagggaggaatctcagaagttaggcctaact 171
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 aagaaagaccctaaaacaaccagggaggaatctcagaagttaggcctaact 238
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 171
Length of database: 571
Length adjustment: 8
Effective length of query: 163
Effective length of database: 563
Effective search space: 91769
Effective search space used: 91769
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
