CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTAATGGACCATCAAGTGTCCAATCAGGACCATAGGAACGTCCTTGA
ATGAGTTATCTTTAATCTTCCTTCCATTCTTAAGTCTCGCTTGTTTCAGT
TCAGCTGAAATTGCATCCTACTCTGTGGTTTGTAGAAAAAGTCCACAGTG
CTTTTGTCTCCTGTTTTCAATTTAGGGTCCTCTCTCTCCTCTAATCACCA
GATGCCAGTATGTTTTCTAATAATTCTTGCTTTGCCAGTTTCTGGATTAA
CAAACTTCCTCTGCCTCTGGGTCTGAAGCTCTCTGCCATGGCAGTGGTAG
CAGAGACTTTTTTTTTTTAATTCACCCACCCATCTCTCGAAACCACGAAA
AAAGCCCAAATAACAACTACCTTCATGTAAATATTGAGCTATGGCATTTC
CTTCTTGTGTTCTGGTGAGGGCCTCTGCTTGCCCTAGTGAACCATCTGGG
TGTGAGAGCTTTCATTCCTTATGGATGGCTACATCCAATTCCCTAAACAG
GACTCCTTAAATAGACTCCTTGTAGCACTTGAGATGAGAGGCAGAGACAC
TTGGGGGATGGATCTCCCCATACCACTTATGCATGGCATTTTGAAGTTGT
GATGGTTTTTCTAGTATCTCACCATCTCTGCTAGGAGTTTTGTGACAGTC
TCTATCTCTGTCTAGTANAACAGTTGGCCCTAGAGTAGATCCCATTTCTA
GG

ATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCACACACAGCCATCAGACTCCCCAT
GGTAGCATCATCTTCATTTTAAACAGGAGGAAGCAAATCATCGCAGCTAT
GTCTGCGGTAGACAGAGACTGTGAGCTGTCGAAGCAGGTCCCTAACACAG
CATACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNTTTTTTNNNNNNNNTNNTNNTTNNTNNN
NNNNNNNNNTTTTTTTTTTTTCCCCCCCCCCCCCCNCCCNNNNNNNNNNN
NNNNNNNGGGGGGGCCCCCCCCTTTAAAAAAAAAAAAAAATGGGTGGGGG
GGGCGCTCTTCCCCTACTCCCCCTTTTCCCCCCCTTCCCACTCCTCCCCC
CCCCCTCCTCTTTCTTCCCTCCCCCCTTCCCTTCCCCCCACTCCTTCTTT
TCACCCCCCTCCCTTCCCCCCTCCCTTTCCTTCCCTTCTTTCACTACTTA
AACCCTTTCCCCTTCCTCCTTTTACCTCCCCCCTCCCTTTCCCCTTTTCC
CCTTTCCCCCACCCCTTCCCTTCCCTTCCTCCCTATTTTCCTTTCCTTCC
CCCCCTATTTCCCCCTTTTCCTTCCCCTCCCTTCCCTTCCCTTTCCCTCC
CCTTTCCTCCTTTACTTTCC

Query= MSMg01no064_p18.b1 MSMg01no064_p18.b1 CHROMAT_FILE:
MSMg01no064_p18.b1 PHD_FILE: MSMg01no064_p18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:10:21 2005
         (327 letters)



>mm_chr12_12582990_12583716
          Length = 727

 Score =  590 bits (305), Expect = e-173
 Identities = 308/309 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctaatggaccatcaagtgtccaatcaggaccataggaacgtccttgaatgagtta 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctaatggaccatcaagtgtccaatcaggaccataggaacgtccttgaatgagtta 264

                                                                       
Query: 65  tctttaatcttccttccattcttaagtctcgcttgtttcagttcagctgaaattgcatcc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tctttaatcttccttccattcttaagtctcgcttgtttcagttcagctgaaattgcatcc 324

                                                                       
Query: 125 tactctgtggtttgtagaaaaagtccacagtgcttttgtctcctgttttcaatttagggt 184
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 325 tactctgtggtttgtagaaaaagtccacagtggttttgtctcctgttttcaatttagggt 384

                                                                       
Query: 185 cctctctctcctctaatcaccagatgccagtatgttttctaataattcttgctttgccag 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cctctctctcctctaatcaccagatgccagtatgttttctaataattcttgctttgccag 444

                                                                       
Query: 245 tttctggattaacaaacttcctctgcctctgggtctgaagctctctgccatggcagtggt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttctggattaacaaacttcctctgcctctgggtctgaagctctctgccatggcagtggt 504

                    
Query: 305 agcagagac 313
           |||||||||
Sbjct: 505 agcagagac 513


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 727
Length adjustment: 9
Effective length of query: 318
Effective length of database: 718
Effective search space:   228324
Effective search space used:   228324
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no064_p18.g1 MSMg01no064_p18.g1 CHROMAT_FILE:
MSMg01no064_p18.g1 PHD_FILE: MSMg01no064_p18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:10:21 2005
         (171 letters)



>mm_chr12_12642004_12642574
          Length = 571

 Score =  323 bits (167), Expect = 4e-93
 Identities = 170/171 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcacacacagccatcagactccccatggtagcatcatcttcattttaaacaggaggaagc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tcacacacagccatcagactccccatggtagcatcatcttcattttaaacaggaggaagc 273

                                                                       
Query: 61  aaatcatcgcagctatgtctgcggtagacagagactgtgagctgtcgaagcaggtcccta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aaatcatcgcagctatgtctgcggtagacagagactgtgagctgtcgaagcaggtcccta 213

                                                              
Query: 121 acacagcatactctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 171
           |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 212 acacagcatactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 162


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 171
Length of database: 571
Length adjustment: 8
Effective length of query: 163
Effective length of database: 563
Effective search space:    91769
Effective search space used:    91769
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)