Query= MSMg01no065_g12.b1 MSMg01no065_g12.b1 CHROMAT_FILE:
MSMg01no065_g12.b1 PHD_FILE: MSMg01no065_g12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:10:54 2005
(268 letters)
>mm_chr12_86456462_86457128
Length = 667
Score = 456 bits (236), Expect = e-133
Identities = 257/264 (97%), Gaps = 1/264 (0%)
Strand = Plus / Plus
Query: 5 gaattctctctcttggcagcactgttactcatcttaaaatcagtaaacgctatagaccag 64
|||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 205 gaattctctctcttggtagcactgttactcatcttaaaatcagtaaacgcaaaagaccag 264
Query: 65 ttaagtccaggacttttgactggtttggtaagaacgctattattgcctaatgcagagttt 124
||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 265 ttaagcccaggacttttgactggtttggtaagaa-gctattattgcctaatgcagagttt 323
Query: 125 ggaggagggccatccacgtgtggtccagattaacttgttcttacgagtgttgctttgagt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ggaggagggccatccacgtgtggtccagattaacttgttcttacgagtgttgctttgagt 383
Query: 185 tactttgcattccaagcatctttagggttctgagaggctgctttctagtacctcttgagg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tactttgcattccaagcatctttagggttctgagaggctgctttctagtacctcttgagg 443
Query: 245 aactgtgttgctgcctcgttacag 268
||||||| |||||||||||||||
Sbjct: 444 aactgtggggctgcctcgttacag 467
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 268
Length of database: 667
Length adjustment: 9
Effective length of query: 259
Effective length of database: 658
Effective search space: 170422
Effective search space used: 170422
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no065_g12.g1 MSMg01no065_g12.g1 CHROMAT_FILE:
MSMg01no065_g12.g1 PHD_FILE: MSMg01no065_g12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:10:54 2005
(176 letters)
>mm_chr12_86584642_86585217
Length = 576
Score = 306 bits (158), Expect = 6e-88
Identities = 170/174 (97%)
Strand = Plus / Minus
Query: 1 aaagaaaccaaagcctctggctgtatccagagggagctggggtggtggctgaaggttagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 aaagaaaccaaagcctctggctgtatccagagggagctggggtggtggctgaaggttagg 315
Query: 61 cgtggttgagtctgtgtgtgctggacagaaggctgcaggacttgagtgtgttcgagggtt 120
||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 314 cgtggttgagtctgtgtgtgctggacagaaggctgcaggacttgagtatgtttgagggtt 255
Query: 121 gagggtgctcctggtctatctagcctatgttgttccacccccttaagacactgt 174
||||||||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 254 gagggtgctcctggtctatctagcctatgttgttccaaccccttaagtcactgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 176
Length of database: 576
Length adjustment: 8
Effective length of query: 168
Effective length of database: 568
Effective search space: 95424
Effective search space used: 95424
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
