Query= MSMg01no066_l06.b1 MSMg01no066_l06.b1 CHROMAT_FILE:
MSMg01no066_l06.b1 PHD_FILE: MSMg01no066_l06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:35 2005
(378 letters)
>mm_chr12_51487132_51487909
Length = 778
Score = 702 bits (363), Expect = 0.0
Identities = 372/375 (99%)
Strand = Plus / Plus
Query: 1 cagggacaagagcagcactgaacagatgatattcatggagtctgttttttgataaacaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagggacaagagcagcactgaacagatgatattcatggagtctgttttttgataaacaat 260
Query: 61 ctcagatcactgtaagcaggatggtccactggcttgtttgggtcttaggtagagagagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcagatcactgtaagcaggatggtccactggcttgtttgggtcttaggtagagagagca 320
Query: 121 agcagttgatgctgttggtcacagcactgaggtaggtactccatcttgagtactgagatg 180
||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||
Sbjct: 321 agcagttgatgctgttggtcacagcactgaggtaggtactccatcttcagtactaagatg 380
Query: 181 aaatcaagcaaacacaacctcgtgtaaaacatcttacgatgtgatctataacttctgaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaatcaagcaaacacaacctcgtgtaaaacatcttacgatgtgatctataacttctgaat 440
Query: 241 tctgaatagtctgtgctaggtggcactggtgatcatagttcctgatttaggggacgtttt 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctgaaaagtctgtgctaggtggcactggtgatcatagttcctgatttaggggacgtttt 500
Query: 301 tgagatctatattgtggcatgtatacgtgactaagaatatttgcagcccctttcatctat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgagatctatattgtggcatgtatacgtgactaagaatatttgcagcccctttcatctat 560
Query: 361 cagcacaccttgtta 375
|||||||||||||||
Sbjct: 561 cagcacaccttgtta 575
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 378
Length of database: 778
Length adjustment: 9
Effective length of query: 369
Effective length of database: 769
Effective search space: 283761
Effective search space used: 283761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no066_l06.g1 MSMg01no066_l06.g1 CHROMAT_FILE:
MSMg01no066_l06.g1 PHD_FILE: MSMg01no066_l06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:35 2005
(224 letters)
>mm_chr12_51619520_51620143
Length = 624
Score = 404 bits (209), Expect = e-117
Identities = 218/221 (98%), Gaps = 2/221 (0%)
Strand = Plus / Minus
Query: 5 gaattcagtttgtgtcactttggggaa-ataaacattgtttctctgtcatatgtctttga 63
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 424 gaattcagtttgtgtcactttggggaatataaacattgtttctctgtcatatgtctttga 365
Query: 64 aatgatatcatatgttctgagaactcaatggggtatcgagagtgccagaatttgctagag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 aatgatatcatatgttctgagaactcaatggggtatcgagagtgccagaatttgctagag 305
Query: 124 gagaaatacatatgtataactattatagatgaagatatgactctatagaaatgagatttt 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 304 gagaaatacatatgtataactattatagatgaagatatgactctatagaaatgaga-ttt 246
Query: 184 ttttctcattaggtttccaataaagttaggccacaattaag 224
|||||||||||||||||||||||||||||| ||||||||||
Sbjct: 245 ttttctcattaggtttccaataaagttaggtcacaattaag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 224
Length of database: 624
Length adjustment: 9
Effective length of query: 215
Effective length of database: 615
Effective search space: 132225
Effective search space used: 132225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
