Query= MSMg01no068_f13.b1 MSMg01no068_f13.b1 CHROMAT_FILE:
MSMg01no068_f13.b1 PHD_FILE: MSMg01no068_f13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:45 2005
(179 letters)
>mm_chr12_40123992_40124571
Length = 580
Score = 333 bits (172), Expect = 5e-96
Identities = 178/180 (98%), Gaps = 1/180 (0%)
Strand = Plus / Plus
Query: 1 aagaaaaaaa-atgtgattggttccatatgtctaaagaatgaaagagcttgttgttgagt 59
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagaaaaaaacatgtgattggttccatatgtctaaagaatgaaagagcttgttgttgagt 260
Query: 60 aaactctggtctgtggagcttggttatgatgatgaccgcatcagcaacttggttgtctct 119
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaactctggtctgtggggcttggttatgatgatgaccgcatcagcaacttggttgtctct 320
Query: 120 gtccctgtccatttcattccactttatttctagggagaaaataatataattgttaatgtg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtccctgtccatttcattccactttatttctagggagaaaataatataattgttaatgtg 380
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 179
Length of database: 580
Length adjustment: 8
Effective length of query: 171
Effective length of database: 572
Effective search space: 97812
Effective search space used: 97812
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no068_f13.g1 MSMg01no068_f13.g1 CHROMAT_FILE:
MSMg01no068_f13.g1 PHD_FILE: MSMg01no068_f13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:45 2005
(276 letters)
>mm_chr12_40298261_40298936
Length = 676
Score = 455 bits (235), Expect = e-132
Identities = 266/277 (96%), Gaps = 4/277 (1%)
Strand = Plus / Minus
Query: 1 cctaacacctgagccatctctccagctctggttctgatcatctttgagcatagtaactga 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 605 cctaacacctgagccatctctccagctctggttctgatcatatttgagcatagtaactga 546
Query: 61 ttttttttttctgacacgctggaagttatttttgacgtttaaaaacaaaaatataattat 120
| |||||||||||| |||||| ||||||||| | |||||||||||||||||||||||
Sbjct: 545 -tatttttttctgactcgctgg--gttatttttttcatttaaaaacaaaaatataattat 489
Query: 121 taaaattttgt-aaacacatttactttgcctaatatatgaaacaatgctgctctttggga 179
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 taaaattttgtaaaacacatttactttgcctaatatatgaaacaatgctgctctttggga 429
Query: 180 atgaaaattcattcaattttgttttagactgatgataattatactcaccattgcaactct 239
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 atgaaaattcattcaactttgttttagactgatgataattatactcaccattgcaactct 369
Query: 240 gattattgtaatttgtgtttataatgcatcttgcagt 276
|||||||||||||||||||||||||||||||||||||
Sbjct: 368 gattattgtaatttgtgtttataatgcatcttgcagt 332
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 276
Length of database: 676
Length adjustment: 9
Effective length of query: 267
Effective length of database: 667
Effective search space: 178089
Effective search space used: 178089
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
