Query= MSMg01no075_c08.b1 MSMg01no075_c08.b1 CHROMAT_FILE:
MSMg01no075_c08.b1 PHD_FILE: MSMg01no075_c08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:23:44 2005
(241 letters)
>mm_chr12_62033147_62033787
Length = 641
Score = 443 bits (229), Expect = e-129
Identities = 240/247 (97%), Gaps = 6/247 (2%)
Strand = Plus / Minus
Query: 1 aaggtatctgtgtcactggtaaatatgcatatttttctgcatgtgtttgggttatattta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 aaggtatctgtgtcactggtaaatatgcatatttttctgcatgtgtttgggttatattta 373
Query: 61 cccggagcagaagcgacctttgggtcagcagggcctggacaagaagctcatgcacactgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 cccggagcagaagcgacctttgggtcagcagggcctggacaagaagctcatgcacactgt 313
Query: 121 ggctgagacaagagctctttctgcttaatcattctcaatacatgttttcctttctacatt 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 312 ggctgagacaagagctctttctgcttaatcattctcagtacatgttttcctttctacatt 253
Query: 181 tccaaacgtagggaagcatttgatgcacttcaccat------aaaaaaaaaaaaaaaacc 234
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 252 tccaaacgtagggaagcatttgatgcacttcaccataaaaaaaaaaaaaaaaaaaaaacc 193
Query: 235 cactgtc 241
|||||||
Sbjct: 192 cactgtc 186
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no075_c08.g1 MSMg01no075_c08.g1 CHROMAT_FILE:
MSMg01no075_c08.g1 PHD_FILE: MSMg01no075_c08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:23:44 2005
(518 letters)
>mm_chr12_61907535_61908452
Length = 918
Score = 948 bits (490), Expect = 0.0
Identities = 511/518 (98%)
Strand = Plus / Plus
Query: 1 actcggacaaccggattcttctaaggcaaagctttattgcttcatctgaaggaagaccct 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actcggacaaccggattcttctaaggcaaagctttattgcttcatctgaaggaagacccc 260
Query: 61 gaacaaggaaaatggtgctgcttatatacccctccgtgtgacatgccagctcctgattag 120
|||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||
Sbjct: 261 gaacaaggaaaatggtgctgcttatatacccctccgtgtgacgtgtcagctcctcattag 320
Query: 121 ctgctcactcatcaccccactactacgccccgggatgggcagtgacttggcacgaattta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgctcactcatcaccccactactacgccccgggatgggcagtgacttggcacgaattta 380
Query: 181 ctcttgcacctgtacacattacttgtttaccaattaggcacagcggaggccagtgccatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctcttgcacctgtacacattacttgtttaccaattaggcacagcggaggccagtgccatc 440
Query: 241 ttgtaatggcgattgctcacagatctccacaattatgcaagatacaagtttatctttacg 300
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 441 ttgtaatggcgattgctcacagctctccacaattatgcaagatacaagtttatctttaag 500
Query: 301 ttatttcatgcctaaatagcatagttaattgatgaggcagggtttttatatcaacaaaaa 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctatttcatgcctaaatagcatagttaattgatgaggcagggtttttatatcaacaaaaa 560
Query: 361 gtgttcttatgttacattgtatgtgtgcctgaaaacatatatatgtaaaattgatttgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtgttcttatgttacattgtatgtgtgcctgaaaacatatatatgtaaaattgatttgag 620
Query: 421 taccaacacttatgtctttgctattcctaagatatatatcatggtagtgtaaaaataaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 taccaacacttatgtctttgctattcctaagatatatatcatggtagtgtaaaaataaag 680
Query: 481 ctcctataaataataaatatattgctttttctgtactc 518
||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctcctataaataataaatatattgctttttctgtactc 718
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 918
Length adjustment: 10
Effective length of query: 508
Effective length of database: 908
Effective search space: 461264
Effective search space used: 461264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
