Query= MSMg01no075_f19.b1 MSMg01no075_f19.b1 CHROMAT_FILE:
MSMg01no075_f19.b1 PHD_FILE: MSMg01no075_f19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:00 2005
(348 letters)
>mm_chr12_112617795_112618543
Length = 749
Score = 644 bits (333), Expect = 0.0
Identities = 345/349 (98%), Gaps = 1/349 (0%)
Strand = Plus / Plus
Query: 1 atgatgtctaaacaaatgagggtggctctgtgccagtgcaactttatttatagaagccag 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 atgatgtctaaacaaatgagggtggctctgtgccagtgcaactttatttacagaagccag 260
Query: 61 gggtttatagggctgcagtttgccaactcctgcttcacagcagaagccgtgatggtggga 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 261 gggtttatagggctgcagtttgccaactcttgcttcacagcagaagccgtgatggtggga 320
Query: 121 tttcagactta-cagcctcaacccctgttggagaaagagaggtctgactaggggaaacaa 179
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttcagacttaacagcctcaacccctgttggagaaagagaggtctgactaggggaaacaa 380
Query: 180 agtttccatttctctttaaatcagtgtgagaacgaaacttgcagtctgagcctgaaagta 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtttccatttctctttaaatcagtgtgagaacgaaacttgcagtctgagcctgaaagta 440
Query: 240 tcctttcaaatctctaagaacaacaggcgataatcccaaagagaaaggaacaaatattcg 299
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcctttcaaatcactaagaacaacaggcgataatcccaaagagaaaggaacaaatattcg 500
Query: 300 ggacaataaactatgcagaaagaaaacacaaaggattaatagacacaag 348
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggacaataaactatgcagaaagaaaacacaaaggattaatagacacaag 549
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 348
Length of database: 749
Length adjustment: 9
Effective length of query: 339
Effective length of database: 740
Effective search space: 250860
Effective search space used: 250860
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no075_f19.g1 MSMg01no075_f19.g1 CHROMAT_FILE:
MSMg01no075_f19.g1 PHD_FILE: MSMg01no075_f19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:00 2005
(346 letters)
>mm_chr12_112805060_112805805
Length = 746
Score = 634 bits (328), Expect = 0.0
Identities = 331/332 (99%)
Strand = Plus / Minus
Query: 1 attcctaggaagtctatggtaagttgaggaactccgatgagtccggtgaactgtagagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 attcctaggaagtctatggtaagttgaggaactccgatgagtccggtgaactgtagagat 273
Query: 61 gctgggcaccgggacaaacctggacattcacagctcctgatctcaaaactcagtacaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 gctgggcaccgggacaaacctggacattcacagctcctgatctcaaaactcagtacaaaa 213
Query: 121 ctacaaacaccactgggcatggtggctcacactgttaattccccccactctgcgggctgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 ctacaaacaccactgggcatggtggctcacactgttaattccccccactctgcgggctgg 153
Query: 181 ggcaggtggatcgctgagttcaaggccagcctgttttacagagtgagatccaggacatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 ggcaggtggatcgctgagttcaaggccagcctgttttacagagtgagatccaggacatca 93
Query: 241 ggacaactatatagataaaccatgtttgtttgtttgtttgtttgtttgtttgtttaaaaa 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 ggacaactacatagataaaccatgtttgtttgtttgtttgtttgtttgtttgtttaaaaa 33
Query: 301 aagactacagtcctgaggtgtgaagagatggc 332
||||||||||||||||||||||||||||||||
Sbjct: 32 aagactacagtcctgaggtgtgaagagatggc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space: 248369
Effective search space used: 248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
