Query= MSMg01no075_l20.b1 MSMg01no075_l20.b1 CHROMAT_FILE:
MSMg01no075_l20.b1 PHD_FILE: MSMg01no075_l20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:29 2005
(583 letters)
>mm_chr9_76941762_76942744
Length = 983
Score = 874 bits (452), Expect = 0.0
Identities = 534/562 (95%), Gaps = 6/562 (1%)
Strand = Plus / Plus
Query: 26 gtaatctcaag-cccagtatagaataaaaggtacaaatagagtcctgtaaaccatcatgt 84
||||||||||| |||| ||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 226 gtaatctcaagcccca-tatagaataaaagctacaaatagagtcctataaaccatcatgt 284
Query: 85 atcatgggctaattatactagagaggaaaaaggcttggaataaatttacaatctaggaat 144
||| |||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 285 atcttgggctaattgcactagagagaaaaaaggcttggaataaatttacaacctaggaat 344
Query: 145 acattccttttaggttaggaatgaggccactatctggtaactaaatgttata-agctggg 203
|||||| ||||||||||||||||||||||||||||||||||||||| ||||| | |||||
Sbjct: 345 acattctttttaggttaggaatgaggccactatctggtaactaaatcttataca-ctggg 403
Query: 204 aatggacaatttattgtaggtacaataacagaaaataaatgatggagtagtttatctgta 263
||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 404 aatgggcaatttattgtaggtacaagaacagaaaataaatgatggagtagtttatctgta 463
Query: 264 caaagttaaaaataaaaagacacaaggcagctgatttgtctcttgacaaatctgttgtaa 323
|||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 464 caaagttaaaaataaaaagacacaaggcagcttatttttctcttgacaaatctgttgtaa 523
Query: 324 cttgtgacataaaaact--tgtcttatacccagaagatgttcctacatgtaataaggaca 381
||||||||||||||||| ||| |||||||||||||||| ||| ||||||||||||||||
Sbjct: 524 cttgtgacataaaaactattgttttatacccagaagatggtccaacatgtaataaggaca 583
Query: 382 catgctccactatgttcatagaagccttatttataatatccagaagctggaaagaaccca 441
|||||||||| |||||||||| |||||||||||||||| |||||||||| ||||||||||
Sbjct: 584 catgctccacaatgttcatagcagccttatttataatagccagaagctgaaaagaaccca 643
Query: 442 gatgtccctcaacagaggaatggatacagaaaatgtggtacatttacacaatggagtatt 501
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 644 gatgtccctcaacagaggaatggatacagaaaatgtggtacatttacacaatggagtact 703
Query: 502 acacagctattaaaaacaatgaattcatgaaattcttagacaaatggatggaactagaaa 561
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 704 acacagctattaaaaacaatgaattcatgaaattcttaggcaaatggatggaactagaaa 763
Query: 562 atatcatcctgagtgtgataac 583
||||||||||||||||||||||
Sbjct: 764 atatcatcctgagtgtgataac 785
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 983
Length adjustment: 10
Effective length of query: 573
Effective length of database: 973
Effective search space: 557529
Effective search space used: 557529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no075_l20.g1 MSMg01no075_l20.g1 CHROMAT_FILE:
MSMg01no075_l20.g1 PHD_FILE: MSMg01no075_l20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:29 2005
(536 letters)
>mm_chr12_82397746_82398681
Length = 936
Score = 1029 bits (532), Expect = 0.0
Identities = 535/536 (99%)
Strand = Plus / Plus
Query: 1 taacaggcagggccccaggggtgagtgccttgaaaaatcaatcttttctttccagcgtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taacaggcagggccccaggggtgagtgccttgaaaaatcaatcttttctttccagcgtga 260
Query: 61 gacctgtaaatctggtaataattataagccatggctctgttacatggcagagatggaggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gacctgtaaatctggtaataattataagccatggctctgttacatggcagagatggaggg 320
Query: 121 attttgcagataacagagtccttaattagctgatgcttcagccttgactttgagggaaaa 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attttgcagataacagagtccataattagctgatgcttcagccttgactttgagggaaaa 380
Query: 181 tatcatacatgtgcccaactaattaaataaactctttaaaagtaacagaggttctttctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatcatacatgtgcccaactaattaaataaactctttaaaagtaacagaggttctttctg 440
Query: 241 tagatggacataaaaaggtaagccatgaattcgccagctgggagaacactacttctacaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tagatggacataaaaaggtaagccatgaattcgccagctgggagaacactacttctacaa 500
Query: 301 caatcctgagattggaatgagacccccaagactcaggtgagagaagaaccctagctggta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caatcctgagattggaatgagacccccaagactcaggtgagagaagaaccctagctggta 560
Query: 361 tcttaatttgaacccagaaactgattcacaagacgctgatagataatagataattgttgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcttaatttgaacccagaaactgattcacaagacgctgatagataatagataattgttgc 620
Query: 421 ttcgttgtgttaaatgaagcagcaattgaacattaacgcatgtatccaagaggtagcaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttcgttgtgttaaatgaagcagcaattgaacattaacgcatgtatccaagaggtagcaga 680
Query: 481 gtcagggcaaaacacaagcccacctgcctccatagctgattttctttccctttgtg 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtcagggcaaaacacaagcccacctgcctccatagctgattttctttccctttgtg 736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 936
Length adjustment: 10
Effective length of query: 526
Effective length of database: 926
Effective search space: 487076
Effective search space used: 487076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
