Query= MSMg01no076_o12.b1 MSMg01no076_o12.b1 CHROMAT_FILE:
MSMg01no076_o12.b1 PHD_FILE: MSMg01no076_o12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:03 2005
(583 letters)
>mm_chr12_98794564_98795543
Length = 980
Score = 663 bits (343), Expect = 0.0
Identities = 368/377 (97%), Gaps = 3/377 (0%)
Strand = Plus / Minus
Query: 206 aagagagtttgtatattgttctaggctctcataaagagacagcctgtttaccacaatgga 265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 aagagagtttgtatattgttctaggctctcataaagagacagcctgtttaccacaatgga 720
Query: 266 ggttttgcccagcatgaaccctaaaagtcttcccacctttattacactatcactatccag 325
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 719 ggttttgcccagcatgaatcctaaaagtctccccacctttattacactatcactatccag 660
Query: 326 ttctatcttctatctatccccattacccagttttaaagcttatcctcactaacaaaaaaa 385
|||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 659 ttctatcttctatctacccccattacccagttttaaagcttatcctcact-agaaaaaa- 602
Query: 386 tattgttaagacaacacctcaacttattgtttacatacttctgtttcaatctacttgggt 445
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 601 -attgttaagacaacacctcaacttattgtttacatacttctgtttcaatccacttgggt 543
Query: 446 tactataaaatacatgacaggatagtttatagacaacaggaacttatttcttgttctaaa 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tactataaaatacatgacaggatagtttatagacaacaggaacttatttcttgttctaaa 483
Query: 506 ggcaaagaaattcatgactgaagcattagctgatggtagcggcccagactaaatatagac 565
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 482 ggcaaagaaattcatgactgaagcattagctgatggtagcggctcagactaaatatagac 423
Query: 566 tttactgtcaaatacca 582
|||||||||||||||||
Sbjct: 422 tttactgtcaaatacca 406
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 980
Length adjustment: 10
Effective length of query: 573
Effective length of database: 970
Effective search space: 555810
Effective search space used: 555810
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no076_o12.g1 MSMg01no076_o12.g1 CHROMAT_FILE:
MSMg01no076_o12.g1 PHD_FILE: MSMg01no076_o12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:03 2005
(632 letters)
>mm_chr12_98663401_98664433
Length = 1033
Score = 1139 bits (589), Expect = 0.0
Identities = 622/635 (97%), Gaps = 5/635 (0%)
Strand = Plus / Plus
Query: 1 catttgagcaatatcagaaaatattaatgtctgaagagttaagtgtttgatcagagttag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catttgagcaatatcagaaaatattaatgtctgaagagttaagtgtttgatcagagttag 260
Query: 61 caggttatttgacacactgtagcttcttctttttagaggaattaagtatgattttaataa 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caggttatttgacacactgtagcttcttctttttagaggaattaagtatgattttaatac 320
Query: 121 cttatttgggactgttctatgttagttttgagtaagaacaagaatttaattatattcttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttatttgggactgttctatgttagttttgagtaagaacaagaatttaattatattcttt 380
Query: 181 cctgagaatcatcattcagtctcaatagaaatgcaaaaagtgcatacacaaagaaagaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctgagaatcatcattcagtctcaatagaaatgcaaaaagtgcatacacaaagaaagaaa 440
Query: 241 atgttgaaatgaaggactgatgtaaaatgtactgtatttgagccaacttgtggtgtttta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgttgaaatgaaggactgatgtaaaatgtactgtatttgagccaacttgtggtgtttta 500
Query: 301 gtcccccaacttccataaattcagggtctagcatttatcaactcaaacatcactccattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtcccccaacttccataaattcagggtctagcatttatcaactcaaacatcactccattt 560
Query: 361 ggtcctcttttattattaaatatgacattattggctgtattttatgacaagactttttca 420
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 561 ggtcctcttttattattaaatatgacattattggctgtattttatgacaacactttttca 620
Query: 421 aatcatctttagcaaaaaaaaaatgagactgttttaactattttagacaatttaaagata 480
|||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 621 aatcatctctagcaaaaaaaaaaagagactgttttaattattttagacaatttaaagata 680
Query: 481 aatgatacttccctcaaattacctaactgtgccttattttgaagacctgtctgtctgttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aatgatacttccctcaaattacctaactgtgccttattttgaagacctgtctgtctgttt 740
Query: 541 attttttttccc---tatggttcctgaaagattaaaattgtaattattgtcagatccaaa 597
||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 741 atttttt--cccccctatggttcctaaaagattaaaattgtaattattgtcagatccaaa 798
Query: 598 gtccactaaccctatggctatgctggtgtcattgt 632
||||||| |||||||||||||||||||| ||||||
Sbjct: 799 gtccactgaccctatggctatgctggtgacattgt 833
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1033
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1023
Effective search space: 636306
Effective search space used: 636306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
