Query= MSMg01no080_b15.b1 MSMg01no080_b15.b1 CHROMAT_FILE:
MSMg01no080_b15.b1 PHD_FILE: MSMg01no080_b15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:54 2005
(432 letters)
>mm_chr12_57091489_57092319
Length = 831
Score = 804 bits (416), Expect = 0.0
Identities = 428/432 (99%), Gaps = 1/432 (0%)
Strand = Plus / Minus
Query: 1 agctgtcctcaaactcagagatccacctacctctgcctcccaagtgctaggattaaaggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 agctgtcctcaaactcagagatccacctacctctgcctcccaagtgctaggattaaaggt 693
Query: 61 gtgtgccactactctcctttcataataacttgctatcagaagaattaactcaggctctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 gtgtgccactactctcctttcataataacttgctatcagaagaattaactcaggctctca 633
Query: 121 taaaagctaccttaaatcccatctgaggacagcaacccaacaaactaatcaactgcccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 taaaagctaccttaaatcccatctgaggacagcaacccaacaaactaatcaactgcccac 573
Query: 181 ttttagaggctctactaactccaaatgtcatctcactggagaccaaccttctaacatgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 ttttagaggctctactaactccaaatgtcatctcactggagaccaaccttctaacatgtg 513
Query: 241 aatccttctctacagaccaaagtagctttaatcttcctattcatgattttcccctaaact 300
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 aatccttc-caacagaccaaagtagctttaatcttcctattcatgattttcccctaaact 454
Query: 301 ttgccaattacaggcttttagcacatccttctgcagggacatcttacagttgctatttcc 360
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 453 ttgccaattacaggcttttagcacatccttctgcagggacatcttaaagttgctatttcc 394
Query: 361 caagccactttcatttcttctgtcaggtccttcatccctctcttgaacttacaacaaaaa 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 393 caagccactttcatttcttctgtcaggtccttcatccctctcttgaacttacaaaaaaaa 334
Query: 421 tataaaagtagc 432
||||||||||||
Sbjct: 333 tataaaagtagc 322
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 831
Length adjustment: 9
Effective length of query: 423
Effective length of database: 822
Effective search space: 347706
Effective search space used: 347706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no080_b15.g1 MSMg01no080_b15.g1 CHROMAT_FILE:
MSMg01no080_b15.g1 PHD_FILE: MSMg01no080_b15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:54 2005
(337 letters)
>mm_chr12_56941817_56942555
Length = 739
Score = 594 bits (307), Expect = e-174
Identities = 331/339 (97%), Gaps = 2/339 (0%)
Strand = Plus / Plus
Query: 1 caagtgt-gtttttttttttgaataatattgacgttttatgaacgtagtcatttttggtg 59
||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 caagtgtggttttttttttttaataatattgacgttttatgaatgtagtcatttttggtg 260
Query: 60 ctaagttctcaagaattagtgtaaagtcaaaaatgagttaattacttcattgacttcatt 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaagttctcaagaattagtgtaaagtcaaaaatgagttaattacttcattgacttcatt 320
Query: 120 acttcatagcttttaagaagattgaaaaatgggtaaacactagatgctctagagacttgg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acttcatagcttttaagaagattgaaaaatgggtaaacactagatgctctagagacttgg 380
Query: 180 agttttaactaatttgacattatattaattctatggtggtaattattttggataaaaatt 239
||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 agttttaacgaatttgacattacgttaattctatggtggtaattattttggataaaaatt 440
Query: 240 gtttaatttcttttaaactggaccttggatgtccagtttcatattacaactttttttttt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtttaatttcttttaaactggaccttggatgtccagtttcatattacaactttttttttt 500
Query: 300 -ctgtctggactaacatcagaattttttgaaacagtttt 337
||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctgtctggactaacatcagaattttttgaaacagtttt 539
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 739
Length adjustment: 9
Effective length of query: 328
Effective length of database: 730
Effective search space: 239440
Effective search space used: 239440
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
