Query= MSMg01no082_d09.b1 MSMg01no082_d09.b1 CHROMAT_FILE:
MSMg01no082_d09.b1 PHD_FILE: MSMg01no082_d09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:38 2005
(352 letters)
>mm_chr12_17152715_17153466
Length = 752
Score = 656 bits (339), Expect = 0.0
Identities = 345/347 (99%)
Strand = Plus / Plus
Query: 6 gaattccaatctctttccatcttacaaaggcaacagtgccatcctgagacctccactctc 65
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattccaatctcttttcatcttacaaaggcaacagtgccatcctgagacctccactctc 265
Query: 66 acaacctcacctaacactagtcacctgctaaaggtcccttctccaaatatcttcccatga 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 acaacctcacctaacactagtcacctgctaaaggtcccttctccaaatatcttcccatga 325
Query: 126 aaccttagtgctgatgagtgggaactgaggactgcaaacattcagactcctgccaggaat 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 aaccttagtgctgatgagtgggaactgaggactgcaaacattcagactcctgccaggaat 385
Query: 186 cccccagctctgtaaacaaacacaggtaaagggtcccataacacagagacgggaccctct 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 cccccagctctgtaaacaaacacaggtaaagggtcccataacacagagacgggaccctct 445
Query: 246 gaggatagaaatgtcatgctgaagacacacttattatcagtccagtctttcccaggcaaa 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gaggatagaaatgtcatgctgaagacacacttattatcagtccagtctttcccaggcaaa 505
Query: 306 ggaggaagatgcctatagattcttcagtagcctgtgacagctagaag 352
||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 506 ggaggaagatgtctatagattcttcagtagcctgtgacagctagaag 552
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 352
Length of database: 752
Length adjustment: 9
Effective length of query: 343
Effective length of database: 743
Effective search space: 254849
Effective search space used: 254849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no082_d09.g1 MSMg01no082_d09.g1 CHROMAT_FILE:
MSMg01no082_d09.g1 PHD_FILE: MSMg01no082_d09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:38 2005
(370 letters)
>mm_chr12_17311875_17312640
Length = 766
Score = 658 bits (340), Expect = 0.0
Identities = 361/370 (97%), Gaps = 4/370 (1%)
Strand = Plus / Minus
Query: 1 tgtatgctggcaaggccttggcccggtttttcagatgaagtcattgttgcttaagaggca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 tgtatgctggcaaggccttggcccggtttttcagatgaagtcattgttgcttaagaggca 507
Query: 61 gccgcctttggggagtatgttttgaaagggtaggaaggctgggatggcaaaggccactct 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 506 gccgcctttggggagtatgttttgaaagggtaggaaggctgggatggcaaaggctactct 447
Query: 121 ggaacaatattcctgcccaaggtatagacaggaaagactttcaggttgtatctggagcaa 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 446 ggaacaatattcctgcccaaggtatagacaggaaggactttcaggttgtatctggagcaa 387
Query: 181 aggttagtgtccagagctagcactgaagtgggagacgtgggagaggatcaaggataaaga 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 386 aggttagtgtccagagctagcactgaagtgggagatgtgggagaggatcaaggataaaga 327
Query: 241 gagtatggccactaacccagaggccccctgagctcctgtagatagatcattgtcatcctc 300
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 326 gagtatggccactaacccagaggccccctgagctcctg----tagatcattgtcatcctc 271
Query: 301 cagagtgcccctgagagttcacaggtggtgggaaagagacccacggcgctcgacaccctg 360
|||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 270 cagagtgcccctgagagttcacaggtggtgggaaagagacccacggtgctcggcaccctg 211
Query: 361 tggtagaatg 370
||||||||||
Sbjct: 210 tggtagaatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 766
Length adjustment: 9
Effective length of query: 361
Effective length of database: 757
Effective search space: 273277
Effective search space used: 273277
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
