XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATCCGCGGAATTCCT
TCTCTGGCGCGGTGCAGTACAGCACAACTTTCTGAAACCTGGAAAGCAAT
GTTCTGTGCTTCCCAACGTTGTATCCACTGTCACTTGTGCCCATAGAGAA
CTTGAACTTATGTCTGAAGAAGGGGATCCTGTACTTTCTTAAATTTAAGA
ATATCGCTATGTGGTCAATGGTTGCCATACTGGGGATGAAGCTGTAGAGG
TCCTTACAGTTCACCTGGCTTTGTTTTCTGCTGTTAAGCTGGTGACTGCC
CAGTGAACCTTTAAACTCCTGCCCCACTCCATTCTAAACCTTCTATGAGT
TCTTTGGCTGTTTCTCATCTACGACAACTTTCATAGCTTATTTATCTTCA
TATATAACTCGAAAGTAGGAATGGTAATACCTTCAGGAATTCTTTAGTTT
AGTTCAGTAGTTTCTTATTGTTTTTTGTTATAGTTATCATGTGATTTTGT
ATTTCTATATGAAGCTGACCATTGTCCTTTCAAGATCTGTGAAGAATTCT
GGTGAAATTCTTTTATTCACTTTATATCCCAATCATGCCCCCTGCCTCAG
GACAAAACTTATAAAAGCCTAACTTTCCTCTACCCTAGGTTGACCCTGAA
ATCAGGATCATCTGCCTTTGTTAGCATAAACAAAAAACTTAGCTGA

TGCTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXATTTTGTGCAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTTCTGTGTC
TTTTTCTTCCTCTTTTCCCTTCTTCCCCCTTCTCCCCTCCCTCTTTTCCC
CTTCCCCCCTCTTCTTCCCCTTCTTCTCTCTCTTTCTCCTCTTTCCTCCT
CTCCTTTCCTCCCCCCCCCCCCCCCCCCTCCCCTTCCCCTCCTCCTCCTT
CTTCCTTCCCTCCCCTTCTCCCCCCTCTTTTCTTCTCACCTTCTCCTCCC
CTCTTCCTCTTCTTTTCTTTTTTTTTCCTTTTCCTTTTTCTCCCCTACTC
CTTTCTTTATCTCTGTCTCTTTTCTTTTCTCCCCTCTTTCCCTTTTTTCC
TTCTTCTTTTCTTCTCTCCCTCCTTTCTTTTCCCCCCTTCTCTCTCTCTT
CTTCTTTCTCTCTCTTCCCCCCTTTCCCCCTTCTCTTCTCCCTCCCCTCT
CTCTCCTTTTTCCTCTCCTCCTTCTTCTCCCCTCTCCTCTTTCTTTCCCT
CCTTCTTTCCTTTCCTTCTTCTTCCTTCCCCCCTCTTTCCCTTTCCTTTC
CCTTCTCTCTTCTCCCTTTTTCCTCCCCTCTCCTTCCTTCTTTCTCTCCT
CCTTTTCCCCTCTTCTTCTTCCTTCTCCCCCTCCATTTCCGTCACTCCTC
CTTCTTTCN

Query= MSMg01no083_c21.b1 MSMg01no083_c21.b1 CHROMAT_FILE:
MSMg01no083_c21.b1 PHD_FILE: MSMg01no083_c21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:50 2005
         (575 letters)



>mm_chr12_51546370_51547344
          Length = 975

 Score =  837 bits (433), Expect = 0.0
 Identities = 524/571 (91%), Gaps = 31/571 (5%)
 Strand = Plus / Minus

                                                                       
Query: 6   gaattccttctctggcgcggtgcagtacagcacaactttctgaaacctggaaagcaatgt 65
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 gaattccttctctggtgcggtgcagtacagcacaactttctgaaacctggaaagcaatgt 807

                                                                       
Query: 66  tctgtgcttcccaacgttgtatccactgtcacttgtgcccatagagaacttgaacttatg 125
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 tctgtacttcccaacgttgtatccactgtcacttgtgcccatagagaacttgaacttatg 747

                                                                       
Query: 126 tctgaagaaggggatcctgtactttcttaaatttaagaatatcgctatgtggtcaa--tg 183
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||
Sbjct: 746 tctgaagaaggggatcctgtactttcttaaatttaagaatatcgctatgtgggcaaaatg 687

                                                                       
Query: 184 gttgccatactggggatgaagctgtagaggtccttacagttcacctggctttgttttctg 243
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 gttgccatactgaggatgaagctgtagaggtccttacagttcacctggctttgttttctg 627

                                                                       
Query: 244 ctgttaagctggtgactgcccagtgaacctttaaactcctgccccactccattctaaacc 303
           || ||    ||                  |||    || |||||||||||||||||||||
Sbjct: 626 ctctt----tg------------------ttt----tc-tgccccactccattctaaacc 594

                                                                       
Query: 304 ttctatgagttctttggctgtttctcatctacgacaactttcatagcttatttatcttca 363
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 593 ttctatgagttctttggctgttcctcatctacgacaactttcatagcttatttatcttca 534

                                                                       
Query: 364 tatataactcgaaagtaggaatggtaataccttcaggaattctttagtttagttcagtag 423
           ||||||||| ||||||||| |||||||||||||||||| |||||| ||||||||||||||
Sbjct: 533 tatataacttgaaagtagggatggtaataccttcaggagttcttttgtttagttcagtag 474

                                                                       
Query: 424 tttcttattgttttttgttatagttatcatgtgattttgtatttctatatgaagctgacc 483
           ||||||||||||||  ||| ||||||| |||||||||||||||||| |||||||||||||
Sbjct: 473 tttcttattgtttt--gttttagttattatgtgattttgtatttctgtatgaagctgacc 416

                                                                       
Query: 484 attgtcctttcaagatctgtgaagaattctggtgaaattcttttattcactttatatccc 543
           |||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 415 attgtcctttcaagatatgtgaacaattctgttgaaattcttttattcactttatatccc 356

                                          
Query: 544 aatcatgccccctgcctcaggacaaaactta 574
           |||||||||||||||||||||||||||||||
Sbjct: 355 aatcatgccccctgcctcaggacaaaactta 325


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 975
Length adjustment: 10
Effective length of query: 565
Effective length of database: 965
Effective search space:   545225
Effective search space used:   545225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)