Query= MSMg01no083_f09.b1 MSMg01no083_f09.b1 CHROMAT_FILE:
MSMg01no083_f09.b1 PHD_FILE: MSMg01no083_f09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:02 2005
(589 letters)
>mm_chr12_112843264_112844252
Length = 989
Score = 1102 bits (570), Expect = 0.0
Identities = 582/586 (99%)
Strand = Plus / Plus
Query: 4 ggaattccacgttcccacgggttttcacatagctttctcaggttggctatactttccctt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccacgttcccacgggttttcacatagctttctcaggttggctatactttccctt 263
Query: 64 tagttttgcttgctttagttttctattttatttggtcattgctattatttattataagat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tagttttgcttgctttagttttctattttatttggtcattgctattatttattataagat 323
Query: 124 actataaccacagcaccaagaaagtaccctctgttttctgattagcccaatagtttgtga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 actataaccacagcaccaagaaagtaccctctgttttctgattagcccaatagtttgtga 383
Query: 184 ttattcatttttgcatggcattaattattgtttataataatctagtagttaaaacttaac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttattcatttttgcatggcattaattattgtttataataatctagtagttaaaacttaac 443
Query: 244 agtttgtggtatagttcaggtatgagccagcctctgaataaagacttgtcccaaaattag 303
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 444 agtttgtggtatagttcaggtatgagccagccactgaataaagacttgtcccaaaattag 503
Query: 304 atctatctaagacaagtaacttgataagtatatttgatttatttggcaatatttaaagct 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 atctatctaagacaagtaacttgataagtatatttgatttatttggcaatatttaaagct 563
Query: 364 aagtgcaccatgcaagtagcctttttttaatgaaaataagttataagtaatctttatata 423
||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aagtgtattatgcaagtagcctttttttaatgaaaataagttataagtaatctttatata 623
Query: 424 tttgtttcctattctttcacgctatgttatttttgggaaaatggcagcaggatatgtgac 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tttgtttcctattctttcacgctatgttatttttgggaaaatggcagcaggatatgtgac 683
Query: 484 agctgtgcccatttttggagcaatgttctaacagcttgttctttggttgtcatttacaat 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 agctgtgcccatttttggagcaatgttctaacagcttgttctttggttgtcatttacaat 743
Query: 544 tgtgtcacagaccagtagcaatccctcccaacccccattttgtttt 589
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tgtgtcacagaccagtagcaatccctcccaacccccattttgtttt 789
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 989
Length adjustment: 10
Effective length of query: 579
Effective length of database: 979
Effective search space: 566841
Effective search space used: 566841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no083_f09.g1 MSMg01no083_f09.g1 CHROMAT_FILE:
MSMg01no083_f09.g1 PHD_FILE: MSMg01no083_f09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:02 2005
(329 letters)
>mm_chr12_112949223_112949952
Length = 730
Score = 630 bits (326), Expect = 0.0
Identities = 329/330 (99%), Gaps = 1/330 (0%)
Strand = Plus / Minus
Query: 1 tggacacttgatg-aaaattatctccacagcccgaatgagcccttttaacaagtgtacta 59
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 tggacacttgatgaaaaattatctccacagcccgaatgagcccttttaacaagtgtacta 471
Query: 60 agaaggagtgtttagagtgggttcttgtcctgcagagactaatacgttatcattcttgct 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 agaaggagtgtttagagtgggttcttgtcctgcagagactaatacgttatcattcttgct 411
Query: 120 atctttcagtgcttgtgaaactgaacacagaagtatggatatgggaaaccaacacccctc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 atctttcagtgcttgtgaaactgaacacagaagtatggatatgggaaaccaacacccctc 351
Query: 180 cattagtaggcttcaggagatccagcgggaagtaaaggctatagagccgcaagtggtcgg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 cattagtaggcttcaggagatccagcgggaagtaaaggctatagagccgcaagtggtcgg 291
Query: 240 cttcagcggcctgtcggatgacaagaactacaagaggctggagaggattctgaccaaaca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 cttcagcggcctgtcggatgacaagaactacaagaggctggagaggattctgaccaaaca 231
Query: 300 actttttgaaattgactctgtggatacgga 329
||||||||||||||||||||||||||||||
Sbjct: 230 actttttgaaattgactctgtggatacgga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 730
Length adjustment: 9
Effective length of query: 320
Effective length of database: 721
Effective search space: 230720
Effective search space used: 230720
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
