Query= MSMg01no083_m11.b1 MSMg01no083_m11.b1 CHROMAT_FILE:
MSMg01no083_m11.b1 PHD_FILE: MSMg01no083_m11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:36 2005
(390 letters)
>mm_chr12_82361325_82362114
Length = 790
Score = 640 bits (331), Expect = 0.0
Identities = 374/389 (96%), Gaps = 4/389 (1%)
Strand = Plus / Minus
Query: 6 gaattctctgtac-caggagccttttgaag-cagtaaaaggcatatgat--ccccctgga 61
|||| |||||||| |||||||||||||||| ||| |||||||||||||| |||||||||
Sbjct: 753 gaatcctctgtacacaggagccttttgaagtcagaaaaaggcatatgatccccccctgga 694
Query: 62 actggaattaaagctgtctgtgagctgtcgtgtgggtgctaggaattgatcttgggccct 121
||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 693 actggaattaaagctgtctgtgagctgtcatgtgggtgccaggaattgatcttgggccct 634
Query: 122 ctacaagagcagtaagctctcttaatcacctacccatctctcctcccagtgtcactagca 181
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 ctacaagaacagtaagctctcttaatcacctacccatctctcctcccagtgtcactagca 574
Query: 182 gagcctcactgaagccctgcagctggggcttgagggtattggtcttttgtcaaagcataa 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 gagcctcactgaagccctgcagctggggcttgagggtattggtcttttgtcaaagcataa 514
Query: 242 acaggtaaatggctacaggggacatcaccgtcttggactcctctttgtgatttttcttgc 301
||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 513 acaggtaaatggctacaggggacatcaccgtctcggacttctctttgtgatttttcttgc 454
Query: 302 acttatcacagtgacttcctgtgttgcctgtttacatcctggtcatctccttttttctgt 361
||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 453 acttatcacagtgacttcctgtgttacctgtttacatcctggtcatctcctttcttctgt 394
Query: 362 ttggacccttgcttgtaataataagtgag 390
||||| |||||||||| ||||||||||||
Sbjct: 393 ttggagccttgcttgtgataataagtgag 365
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 390
Length of database: 790
Length adjustment: 9
Effective length of query: 381
Effective length of database: 781
Effective search space: 297561
Effective search space used: 297561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no083_m11.g1 MSMg01no083_m11.g1 CHROMAT_FILE:
MSMg01no083_m11.g1 PHD_FILE: MSMg01no083_m11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:36 2005
(460 letters)
>mm_chr12_82253574_82254433
Length = 860
Score = 810 bits (419), Expect = 0.0
Identities = 450/461 (97%), Gaps = 3/461 (0%)
Strand = Plus / Plus
Query: 1 aaccccctgtccctcggtgtccatagctgctctatgacttcttatcgtgtgaacttgttt 60
||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 201 aaccctctgtccctcggtgtccatagctgctctatgactttttatcatgtgaacttgttt 260
Query: 61 tcttctctctgtttccttttgtcctctcccgtctgccttccagctcactcctccacttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcttctctctgtttccttttgtcctctcccgtctgccttccagctcactcctccacttct 320
Query: 121 tcctcttctgttttctctccaattccttttcagagacagagtctcattatgtagcccaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcctcttctgttttctctccaattccttttcagagacagagtctcattatgtagcccaag 380
Query: 181 ccagtctcaaaccagtgccctttccatcccaaccttccaagtgttggggtcgtgccattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccagtctcaaaccagtgccctttccatcccaaccttccaagtgttggggtcgtgccattc 440
Query: 241 tgtcaagttttacatgagccatttaatttgtattatcttcattttctatagctataacat 300
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 441 tgtcaagttttacatgagccatttaatttgtattatcttcattttctacagctataacat 500
Query: 301 aagggggtaagatgaattagttagccccccc-ttgtttcctcttttgccatagctagaat 359
||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||
Sbjct: 501 aagggggtaagatgaattagttagcccccccctttttt--tcttttgccatagctagaat 558
Query: 360 caacttctatgagcagttgatctgtttggatgacaacgtttgttaatatgttttaatatc 419
||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 559 caaattctatgagcagttgatctgtttggatgacaacatttgttaatatgttttaatatc 618
Query: 420 tggcttgccttatctgaatgccatgcaacaggatttgaaag 460
||||||||||||||||||||||||||| |||||||||||||
Sbjct: 619 tggcttgccttatctgaatgccatgcagcaggatttgaaag 659
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 460
Length of database: 860
Length adjustment: 10
Effective length of query: 450
Effective length of database: 850
Effective search space: 382500
Effective search space used: 382500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
