Query= MSMg01no084_f20.b1 MSMg01no084_f20.b1 CHROMAT_FILE:
MSMg01no084_f20.b1 PHD_FILE: MSMg01no084_f20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:22 2005
(282 letters)
>mm_chr12_88294649_88295330
Length = 682
Score = 499 bits (258), Expect = e-146
Identities = 272/278 (97%), Gaps = 4/278 (1%)
Strand = Plus / Plus
Query: 3 gaattctattatgtta--ttcccttttatatgacagggaaaaagttttctagtgcatctt 60
||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaattctgttatgttaattt--cttttatatgacagggaaaaagttttctagtgcatctt 260
Query: 61 gtttccatataacagtgtgaaggtcagttagaagtaaaccagtcatgtattatgtaatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtttccatataacagtgtgaaggtcagttagaagtaaaccagtcatgtattatgtaatga 320
Query: 121 gaagctggtcctcatagatttttatccttatgtgaaccctagggtgtgctttcctaaacc 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaagctgatcctcatagatttttatccttatgtgaaccctagggtgtgctttcctaaacc 380
Query: 181 tagatgatatagtctgttatatacttaggttatatggtatagtcattatcatatatatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagatgatatagtctgttatatacttaggttatatggtatagtcattatcatatatatgg 440
Query: 241 cctgtcattggctgaaccttctttatgtagtaagttaa 278
||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctgtcattggctgaaccttctttatgtagtaagttaa 478
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no084_f20.g1 MSMg01no084_f20.g1 CHROMAT_FILE:
MSMg01no084_f20.g1 PHD_FILE: MSMg01no084_f20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:22 2005
(234 letters)
>mm_chr12_88422589_88423222
Length = 634
Score = 453 bits (234), Expect = e-132
Identities = 234/234 (100%)
Strand = Plus / Minus
Query: 1 tccaagaaacagccacctatggtcacaggcctccattgtgggtcctagcacccaccatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tccaagaaacagccacctatggtcacaggcctccattgtgggtcctagcacccaccatga 375
Query: 61 ccctttcctttccctcccagaagactatgcttagagaaggactggtcctcacctttctga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ccctttcctttccctcccagaagactatgcttagagaaggactggtcctcacctttctga 315
Query: 121 tgtgaactctttctggctctgatttggataagaagaggcgggtacaatatgtgcagagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tgtgaactctttctggctctgatttggataagaagaggcgggtacaatatgtgcagagtg 255
Query: 181 accccaggcgcatcagctccatgcctgtcccaagcagagccgctgtgatcacgt 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 accccaggcgcatcagctccatgcctgtcccaagcagagccgctgtgatcacgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
