Query= MSMg01no084_m18.b1 MSMg01no084_m18.b1 CHROMAT_FILE:
MSMg01no084_m18.b1 PHD_FILE: MSMg01no084_m18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:55 2005
(432 letters)
>mm_chr12_99955578_99956409
Length = 832
Score = 658 bits (340), Expect = 0.0
Identities = 362/370 (97%), Gaps = 2/370 (0%)
Strand = Plus / Minus
Query: 5 gaattcctacagtatggcagtttgtagaacgaatgggacagtaggaactttccgctggta 64
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gaattcctacagtagggtagtttgtagaacgaatgggacagtaggaactttccgctggta 312
Query: 65 tatgtgatagactcgcattcagaaggtagtttttcctttgtaaaaatgataagataaacc 124
||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 311 tatgtgatagacttgcattcagaagatagtatttcctttgtaaaaatgataagataaacc 252
Query: 125 ttgggaacatccagggaaaccaaacattcttaaattgttaggctaactttattttatgtg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 ttgggaacatccagggaaaccaaacattcttaaattgttaggctaactttattttatgtg 192
Query: 185 tatgagtattttgcctgcacgcatgtaagagtaccatgcacttgcctggtactcccagag 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 191 tatgagtattttgcctgcacgcatgtaagagtaccatgcacttgcctggtactctcag-- 134
Query: 245 gtcaaaagaggacatgggattcccctaaaattggaatttaggggcttgtgagctaccagg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 gtcaaaagaggacatgggattcccctaaaattggaatttaggggcttgtgagctaccagg 74
Query: 305 tgggtactggtcctctgcaagagcagtaactactcttaaatgcatagccttctttccagc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 tgggtactggtcctctgcaagagcagtaactactcttaaatgcatagccttctttccagc 14
Query: 365 tcattaaaag 374
||||||||||
Sbjct: 13 tcattaaaag 4
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 832
Length adjustment: 9
Effective length of query: 423
Effective length of database: 823
Effective search space: 348129
Effective search space used: 348129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no084_m18.g1 MSMg01no084_m18.g1 CHROMAT_FILE:
MSMg01no084_m18.g1 PHD_FILE: MSMg01no084_m18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:55 2005
(464 letters)
>mm_chr12_99810294_99811157
Length = 864
Score = 890 bits (460), Expect = 0.0
Identities = 463/464 (99%)
Strand = Plus / Plus
Query: 1 ctgactttctctctcctctaggcttagagcactgttttcagctcctcaaatacacgtgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgactttctctctcctctaggcttagagcactgttttcagctcctcaaatacacgtgtt 260
Query: 61 ccttctgctctgtgaacctctgctctgaggttccctctaaggaaatagagcctcttctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccttctgctctgtgaacctctgctctgaggttccctctaaggaaatagagcctcttctca 320
Query: 121 ctggcctggcaactcccactctaggtgccagtaccataagggtgtcatttcctcaggaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctggcctggcaactcccactctaggtgccagtaccataagggtgtcatttcctcaggaaa 380
Query: 181 cctgtcatcctttcctctggcctttgccaatctgcttgttttgtttcagacagaggagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctgtcatcctttcctctggcctttgccaatctgcttgttttgtttcagacagaggagaa 440
Query: 241 gcctaagttgactgggaactcacgaggtagcctcatgttaattaagctcaaaccaatgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcctaagttgactgggaactcacgaggtagcctcatgttaattaagctcaaaccaatgga 500
Query: 301 aatcctgcctcaggctcccaattgctggcaatacaggcaggactcaccacacccagcttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatcctgcctcaggctcccaattgctggcaatacaggcaggactcaccacacccagcttc 560
Query: 361 aaggttttctagcagactttcttaaagcctcttggtgcccacagagcatgctacactttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaggttttctagcagactttcttaaagcctcttggtgcccacagagcatgctacactttg 620
Query: 421 aattcctaatgccaccctgcagtgactaattttgacctgacacc 464
|||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 621 aattcctaatgccaccctacagtgactaattttgacctgacacc 664
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space: 387716
Effective search space used: 387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
