Query= MSMg01no085_b02.b1 MSMg01no085_b02.b1 CHROMAT_FILE:
MSMg01no085_b02.b1 PHD_FILE: MSMg01no085_b02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:35:20 2005
(300 letters)
>mm_chr12_88618886_88619586
Length = 701
Score = 507 bits (262), Expect = e-148
Identities = 274/278 (98%), Gaps = 1/278 (0%)
Strand = Plus / Plus
Query: 24 cctgctgccctga-cacactaatctctttgcagcagaacatatgtagacaggtttttaga 82
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 cctgctgccctgatcacactaatctctttgcagcagaacatatgtagacaggtttttaga 283
Query: 83 tcagactaagacatatcctgacataactcgttcctttccccaaatgccagagatgaaagt 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 tcagactaagacatatcctgacataactcgttcctttccccaaatgccagagatgaaagt 343
Query: 143 agggtgtctgatgagggtctaggtacgcctcccatttcaggttggatcccctccaagcca 202
|||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 344 agggtgtctgatgagggtctaggtacacctcccatttcaagttggatcccctccaagcca 403
Query: 203 gtcacgtgaagaaatgacaccacttccctgtggagtagatgcagttacctgtgtcataaa 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gtcacgtgaagaaatgacaccacttccctgtggagtagatgcagttacctgtgtcataaa 463
Query: 263 tttggggttttgtgcctctgaggtctagccagctccta 300
| ||||||||||||||||||||||||||||||||||||
Sbjct: 464 tgtggggttttgtgcctctgaggtctagccagctccta 501
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 300
Length of database: 701
Length adjustment: 9
Effective length of query: 291
Effective length of database: 692
Effective search space: 201372
Effective search space used: 201372
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no085_b02.g1 MSMg01no085_b02.g1 CHROMAT_FILE:
MSMg01no085_b02.g1 PHD_FILE: MSMg01no085_b02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:35:20 2005
(325 letters)
>mm_chr12_88733854_88734577
Length = 724
Score = 574 bits (297), Expect = e-168
Identities = 318/325 (97%), Gaps = 1/325 (0%)
Strand = Plus / Minus
Query: 1 tgtcaatgttttataagactcagattaaaaatcatctctattacaaactcaggagccatt 60
|||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 524 tgtcaatgctttataagactcagattaaaaatcat-tctattacaaactcaggagccatt 466
Query: 61 attcctcctacagctgcacattcccctgcgatcatctattcaatagcccagtcctcctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 attcctcctacagctgcacattcccctgcgatcatctattcaatagcccagtcctcctct 406
Query: 121 taggggtgcacttgggggaggccagaagaaggaaggacgactcttgtcctacctcgggag 180
||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 taggggtgctgttggggaaggccagaagaaggaaggacgactcttgtcctacctcgggag 346
Query: 181 atgcaaatacagtcagaaatccagggagaaagtctctttccttggctgtactgtattaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 atgcaaatacagtcagaaatccagggagaaagtctctttccttggctgtactgtattaga 286
Query: 241 gtagggataatggaaagggaaatggccagcccatcccttgcaaatcaagtctgacgacag 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 285 gtagggataatggaaagggaaatggccagcccatcccttgcaaatcaagtctgaagacag 226
Query: 301 acatggtgttccatttctgtagtcc 325
||||||||||| |||||||||||||
Sbjct: 225 acatggtgttctatttctgtagtcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 724
Length adjustment: 9
Effective length of query: 316
Effective length of database: 715
Effective search space: 225940
Effective search space used: 225940
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
