Query= MSMg01no089_c05.b1 MSMg01no089_c05.b1 CHROMAT_FILE:
MSMg01no089_c05.b1 PHD_FILE: MSMg01no089_c05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:50 2005
(140 letters)
>mm_chr12_35203334_35203873
Length = 540
Score = 226 bits (117), Expect = 3e-64
Identities = 132/137 (96%)
Strand = Plus / Minus
Query: 4 ggaattctgttttctccattgtgagatctaggcataggactgctgagccatcttgccagc 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 ggaattctgttttctctattgtgagatctaggcataggactgctgagccatcttgccagc 281
Query: 64 cctcaacccctcagcccgccccttctgttcctcaactcggatttgtgctcacatgcccac 123
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 cctcaaccccacagtttgccccttctgttcctcaactcggatttgtgctcacatgcccac 221
Query: 124 agcccaccctgattggt 140
|||||||||||||||||
Sbjct: 220 agcccaccctgattggt 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 140
Length of database: 540
Length adjustment: 8
Effective length of query: 132
Effective length of database: 532
Effective search space: 70224
Effective search space used: 70224
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no089_c05.g1 MSMg01no089_c05.g1 CHROMAT_FILE:
MSMg01no089_c05.g1 PHD_FILE: MSMg01no089_c05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:50 2005
(376 letters)
>mm_chr12_35047359_35048136
Length = 778
Score = 667 bits (345), Expect = 0.0
Identities = 367/375 (97%), Gaps = 2/375 (0%)
Strand = Plus / Plus
Query: 1 tacccttcttgcccacagtccttgtccttaggcagtgggctaaatgctcactcctgtgtc 60
|||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||
Sbjct: 201 tacccttcttgcccacagtccttgtccttaggcagtgggctaaaagatttctcctgtgtc 260
Query: 61 actcaaccttgtgagtactcaggatattgagtggggtccagaggactcacatgttagagt 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attcaaccttgtgagtactcaggatattgagtggggtccagaggactcacatgttagagt 320
Query: 121 gagggaaagctacactcaagtgaaaggcagctatgtgcttctcaaagaa--ctctgacac 178
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 321 gagggaaagctacactcaagtgaaaggcagctatgtgcttctcaaagaaaactctgacac 380
Query: 179 aaaccttcaaaaagaatgacaaacttaagctgtgtactgtctaaataaaatttactaggt 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaccttcaaaaagaatgacaaacttaagctgtgtactgtctaaataaaatttactaggt 440
Query: 239 ctaaaaaggagtggaaaaaaatctatattcaagagaaaaattaagcagtagaaacagact 298
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 ctaaaaaggagtggaaaaaaatctgtattcaagagaaaaattaagcagtagaaacagact 500
Query: 299 tggaaatagcagacagtattagtaaaaatgagttaaggaaggctctgccaatacagagta 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tggaaatagcagacagtattagtaaaaatgagttaaggaaggctctgccaatacagagta 560
Query: 359 atcagaaaacacata 373
|||||||||||||||
Sbjct: 561 atcagaaaacacata 575
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 778
Length adjustment: 9
Effective length of query: 367
Effective length of database: 769
Effective search space: 282223
Effective search space used: 282223
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
