CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATCCGCGGAATT
CTATATCCCCTGTGATGGTGTATAATTGATGGAGACTTGTTTTCAGTTGC
TTAATTCATTCGGTTTGGTCATCCCACATTCAAGCATTCAAAAGTAGTTC
ACAAAGATGAGAGGCCCGGGGAACGTCTTCTAAAAGATCTTGTGCAGTTG
ATACCCAGCTTCCTGATCCTGAAGAAGGAAAGATGTGGACAGGAAACAGA
ATCTGCTTCCTAGTGCTCAGAGTAACTGGAGGTTTCCCAATGATTTATCT
CCAAAGTGAGCCACTCCCCTGCAGCTCTACCGACAGCTGTGCTAAGAAGA
AGTGCAGCTGGAAGAGGTGCCCACGTTTTACAGAAAGCAGACGGACTCTG
CCCTTCCACTTCAAAGCCTAGAGAAGTTTTATCAGTGCTTAGGAAGATAA
ATTGGTGATGAGAAATTGGTTCATGTGAACTAAAACACATAGAGCACTGG
AGTAGGATCAGAATTCTAATTTAGTTGTGAATAATAAGATGTACTGCCGT
GACAGGGAGTGGAAAATCTCACATAGGGCACGACTGGCACATCTCACCCT
CCAAGCGCAGGATACGGGAGCATAGACTGCCTCTATTAGCTTGCTGTAGG
AAGTACTCAAAAGCCCTGTGTGATGACAGACGTTAGCGTGGTGC

GATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGA
AGCACCTGAAAAAATGCTCAACATCCTTAATCATCAGAGAAATGCAAATC
AAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAA
AAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACAC
TCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAATCA
GTCTGGCGGTTCCTCAGAAAACTGGATATAGTACTACCGGAGGATCCAGC
AATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGG
ACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCGGAAGC
TGGAAGGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTG
GTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTA
TGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAG
GTAACACATTCACAAAGGAACTCACACAATATGTACTCACTGATAAGTGG
ATATTAGCCCCAAACCTAAGATACCCCAAGATATAAGATACAATTTCCT

Query= MSMg01no095_i08.b1 MSMg01no095_i08.b1 CHROMAT_FILE:
MSMg01no095_i08.b1 PHD_FILE: MSMg01no095_i08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:34 2005
         (655 letters)



>mm_chr12_53112508_53113565
          Length = 1058

 Score = 1145 bits (592), Expect = 0.0
 Identities = 637/654 (97%), Gaps = 7/654 (1%)
 Strand = Plus / Plus

                                                                       
Query: 7   gaattctatatcccctgtgatggtgt-ataattgatggagacttgttttcagttgcttaa 65
           |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 207 gaattctatatcccctgtgatggtataataattgatggagacttgttttcagttgcttaa 266

                                                                       
Query: 66  ttcattcggtttggtcatcccacattcaagcattcaaaagtagttcacaaagatgagagg 125
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 267 ttcattcggtttggtcatcccacatttaagcattcaaaagtagttcacaaagatgagagg 326

                                                                       
Query: 126 cccggggaacgtcttctaaaagatcttgtgcagttgatacccagcttcctgatcctgaag 185
           ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ccc-gggaacatcttctaaaagatcttgtgcagttgatacccagcttcctgatcctgaag 385

                                                                       
Query: 186 aaggaaagatgtggacaggaaacagaatctgcttcctagtgctcagagtaactggaggtt 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 aaggaaagatgtggacaggaaacagaatctgcttcctagtgctcagagtaactggaggtt 445

                                                                       
Query: 246 tcccaatgatttatctccaaagtgagccactcccctgcagctctaccgacagctgtgcta 305
           |||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 446 tcccaatgatttctctccaaagtgagcctct-ccctgcagctctaccgacagctgtgcta 504

                                                                       
Query: 306 agaagaagtgcagctggaagaggtgcccacgttttacagaaagcagacggactctgccct 365
           |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 505 agaagaagtgcagctggaagaggtgcccacgttttacagaaagcagacggacgctgcctt 564

                                                                       
Query: 366 tccacttcaaagcctagagaagt----tttatcagtgcttaggaagataaattggtgatg 421
           |||||||||||||||||||||||    ||||||||||||||||||||| |||||||||||
Sbjct: 565 tccacttcaaagcctagagaagttttctttatcagtgcttaggaagatgaattggtgatg 624

                                                                       
Query: 422 agaaattggttcatgtgaactaaaacacatagagcactggagtaggatcagaattctaat 481
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agaaattggttcatgtgaactaaaacacatagagcactggagtaggatcagaattctaat 684

                                                                       
Query: 482 ttagttgtgaataataagatgtactgccgtgacagggagtggaaaatctcacatagggca 541
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ttagctgtgaataataagatgtactgccgtgacagggagtggaaaatctcacatagggca 744

                                                                       
Query: 542 cgactggcacatctcaccctccaagcgcaggatacgggagcatagactgcctctattagc 601
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 cgactggcacatctcaccctccaagcgcaggatacgggagcatagactgcctctattagc 804

                                                                 
Query: 602 ttgctgtaggaagtactcaaaagccctgtgtgatgacagacgttagcgtggtgc 655
           || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 ttactgtaggaagtactcaaaagccctgtgtgatgacagacgttagcgtggtgc 858


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1058
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1048
Effective search space:   675960
Effective search space used:   675960
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)