CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTTTATAAAATTCCAGAACTTGGGCTAGAAATTGACTTAGAGAATCCAA
TAAACTCGCAAGCCTTGGACAACATCCAAGCTGAATTTATAGACTGGAAG
AAATATGGGCTTTCCATTGTTCTCCTTTTCACCTTTCCGGGGGTTTCTTT
TGTGTCTATGTGCGTGTGCGAGTGTAAATTTATCATTTTGCTGACACTGG
AGTGGAAATAACCATCGAGGGGACCAAGGTCAGGAATTTTCACTTTGGAT
CTTTCCTGGTCTTTCTGAACTTTGACCCAAACCTGCACCAAGAGTGAATT
TCTTCTCTCTGTATGATGTTGATCTTAGAAAACAAGAGGTTGTTCTTGCA
AATGAATGGCACGAGTCTAACAGCTGAGATGAATGTCGGTCAGCCCTGTG
CAACTTCCAACTCCCTGTTCCTTCTCTGCCTCAGTATGGGCCTATATGAT
GCATGATCTGAGTCACGTGATCCTCTATTTTGTCTCAGTTGCGACAGGGT
GATAAGGGCAAGGAAACGAACTTGGGTGTGTCTGAAAGACATCAGACTTC
TTTGTGTGTCTGGGATGCTATCAATACAGGCGCTGTAGTGATCTGAGCGG
TATCTTTCTTTGCCCATGCTATTGAAAACCTATCTTGTGCTTAA

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCTGAGA
AGCACCTGGAAAAATGTTCAACATCTTTAATCATCAGGGAAATGCAAATC
AAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAA
AAATTCAGGTGACAGCAGATGCTGGAGAGGATGTGGAGAAAGAGGAACAC
TCCTCCATTGTTGGTGGGATTGCAGGTTTGTACAATCCACTCTGGAAATC
AGTCTGGCGGTTCCTCAGAAAATTGAACATAGTACTACCGGAGGATCCAG
CAATACCTCTCCTGGGCATATATCCAGAAGCTGTCCCAACCGGTAAGAAG
GACACATGCTCCACTATGTTCATAGCAAAGTGGGAGTGGGTGGGTAGGGG
AGTGNNTNNTNNTNNNTTTNTTTTTTTTTTTTTTNTTTTTTTTTTTTTTT
TTCTTGTTTTGTTTTGTGCTTTTGTTACCCTTGTCTTGCTTTGTTTTCCG
TTCTTCTCCTTTTCTCGCCCTCTTCTCCTTCTTTTTCTCTGCTCTCCGTC
CTCTGTTTTATTTTTTATGTCATTTCTTTTTTTGTTCTATTACAATCTAT
ATATCTTACATCTATTTATTTTTTTATTTTATTTTAATTTTTGTTCTTTT
ATTTTCGACATTTTCTAGT

Query= MSMg01no095_o08.b1 MSMg01no095_o08.b1 CHROMAT_FILE:
MSMg01no095_o08.b1 PHD_FILE: MSMg01no095_o08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:03 2005
         (647 letters)



>mm_chr12_34905929_34906975
          Length = 1047

 Score = 1230 bits (636), Expect = 0.0
 Identities = 642/644 (99%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattctttataaaattccagaacttgggctagaaattgacttagagaatccaataaac 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 ggaattctttataaaattccagaacttgggctagaaattgacttagagaatccaataaac 788

                                                                       
Query: 64  tcgcaagccttggacaacatccaagctgaatttatagactggaagaaatatgggctttcc 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 tcgcaagccttggacaacatccaagctgaatttatagactggaagaaatatgggctttcc 728

                                                                       
Query: 124 attgttctccttttcacctttccgggggtttcttttgtgtctatgtgcgtgtgcgagtgt 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 attgttctccttttcacctttccgggggtttcttttgtgtctatgtgcgtgtgcgagtgt 668

                                                                       
Query: 184 aaatttatcattttgctgacactggagtggaaataaccatcgaggggaccaaggtcagga 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 aaatttatcattttgctgacactggagtggaaataaccatcgaggggaccaaggtcagga 608

                                                                       
Query: 244 attttcactttggatctttcctggtctttctgaactttgacccaaacctgcaccaagagt 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 attttcactttggatctttcctggtctttctgaactttgacccaaacctgcaccaagagt 548

                                                                       
Query: 304 gaatttcttctctctgtatgatgttgatcttagaaaacaagaggttgttcttgcaaatga 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 gaatttcttctctctgtatgatgttgatcttagaaaacaagaggttgttcttgcaaatga 488

                                                                       
Query: 364 atggcacgagtctaacagctgagatgaatgtcggtcagccctgtgcaacttccaactccc 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 atggcacgagtctaacagctgagatgaatgtcggtcagccctgtgcaacttccaactccc 428

                                                                       
Query: 424 tgttccttctctgcctcagtatgggcctatatgatgcatgatctgagtcacgtgatcctc 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tgttccttctctgcctcagtatgggcctatatgatgcatgatctgagtcacgtgatcctc 368

                                                                       
Query: 484 tattttgtctcagttgcgacagggtgataagggcaaggaaacgaacttgggtgtgtctga 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tattttgtctcagttgcgacagggtgataagggcaaggaaacgaacttgggtgtgtctga 308

                                                                       
Query: 544 aagacatcagacttctttgtgtgtctgggatgctatcaatacaggcgctgtagtgatctg 603
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 307 aagacatcagacttctttgtgtgtctgggatgctatcaacacaggcgctgtagtgatctg 248

                                                       
Query: 604 agcggtatctttctttgcccatgctattgaaaacctatcttgtg 647
           | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 aacggtatctttctttgcccatgctattgaaaacctatcttgtg 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space:   660569
Effective search space used:   660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)