MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-097F01
Chromosome	12 (Build37)
Map Location	5,404,667 - 5,404,838
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Ncoa1, LOC100041995, LOC100042005, LOC100042014, Itsn2, 4930417G10Rik, A830093I24Rik, Pfn4, EG626534, 0610009D07Rik, Fkbp1b, BC068281, Gm1964, Ubxd4, Atad2b, LOC668332, Klhl29
Downstream gene	2810032G03Rik, LOC435292, LOC100042095, LOC672098, LOC100043137, LOC238049
Link	Open Mouse BAC browser

Click to get alignment info.

name	Ncoa1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17977 MGI:1276523
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041995 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041995
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100042005 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042005
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC100042014 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042014
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs

name	Itsn2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20403 MGI:1338049
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930417G10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74855 MGI:1922105
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A830093I24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:207921 MGI:2442121
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pfn4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382562 MGI:1920121
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG626534 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:626534 MGI:3647156
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 576 ESTs, 8 Proteins

name	0610009D07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66055 MGI:1913305
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fkbp1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14226 MGI:1336205
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC068281 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238037 MGI:3040699
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm1964 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:432628 MGI:3583946
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ubxd4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217379 MGI:2442310
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atad2b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320817 MGI:2444798
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 89 ESTs, 18 Proteins

name	LOC668332 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668332
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Klhl29 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208439 MGI:2683857
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 43 ESTs, 17 Proteins

name	2810032G03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72669 MGI:1919919
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 17 ESTs

name	LOC435292 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:435292
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 ESTs, 25 Proteins pseudo : _no_value

name	LOC100042095 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042095
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC672098 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:672098
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100043137 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043137
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC238049 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:238049
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Ncoa1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754799 GeneID:17977 MGI:1276523
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear receptor coactivator 1 transcript_id : NM_010881.1

name	LOC100041995 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262774 GeneID:100041995
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041995 transcript_id : XM_001477354.1

name	LOC100042005 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262776 GeneID:100042005
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to Dmn protein transcript_id : XM_001477368.1

name	LOC100042014 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262778 GeneID:100042014
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs product : hypothetical protein LOC100042014 transcript_id : XM_001477387.1

name	Itsn2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46560562 GeneID:20403 MGI:1338049
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : intersectin 2 transcript_id : NM_011365.2

name	4930417G10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142378242 GeneID:74855 MGI:1922105
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930417G10 gene transcript_id : NM_029107.2

name	A830093I24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:139948412 GeneID:207921 MGI:2442121
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A830093I24 gene transcript_id : NM_175431.3

name	Pfn4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803435 GeneID:382562 MGI:1920121
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : profilin family, member 4 transcript_id : NM_028376.2

name	0610009D07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981274 GeneID:66055 MGI:1913305
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 0610009D07 gene transcript_id : NM_025323.2

name	Fkbp1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:123173727 GeneID:14226 MGI:1336205
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : FK506 binding protein 1b transcript_id : NM_016863.3

name	BC068281 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142362297 GeneID:238037 MGI:3040699
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC068281 transcript_id : NM_173416.2

name	Gm1964 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85702024 GeneID:432628 MGI:3583946
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 1964, (NCBI) transcript_id : NM_001033488.1

name	Ubxd4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375695 GeneID:217379 MGI:2442310
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UBX domain containing 4 transcript_id : NM_145441.3

name	Atad2b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149262840 GeneID:320817 MGI:2444798
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 89 ESTs, 18 Proteins product : ATPase family, AAA domain containing 2B transcript_id : XM_001480129.1

name	Klhl29 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94392376 GeneID:208439 MGI:2683857
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 43 ESTs, 17 Proteins product : kelch-like 29 (Drosophila) transcript_id : XM_906219.2

name	LOC100043137 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262844 GeneID:100043137
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043137 transcript_id : XM_001480137.1

name	LOC100041995 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262775 GeneID:100041995
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477404.1

name	LOC100042005 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262777 GeneID:100042005
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477418.1

name	LOC100042014 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262779 GeneID:100042014
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477437.1

name	Itsn2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46560563 GeneID:20403 MGI:1338049
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA] GO_process : GO:0006897 - endocytosis [Evidence IEA]; GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA] codon_start : 1 note : Eh domain, SH3 domain regulator of endocytosis 2 product : SH3 domain protein 1B protein_id : NP_035495.2

name	4930417G10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037391 GeneID:74855 MGI:1922105
definition	codon_start : 1 product : hypothetical protein LOC74855 protein_id : NP_083383.1

name	A830093I24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:139948413 GeneID:207921 MGI:2442121
definition	codon_start : 1 product : hypothetical protein LOC207921 protein_id : NP_780640.2

name	Pfn4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47058966 CCDS:CCDS25790.1 GeneID:382562 MGI:1920121
definition	GO_component : GO:0015629 - actin cytoskeleton [Evidence IEA]; GO:0005856 - cytoskeleton [Evidence IEA] GO_function : GO:0003779 - actin binding [Evidence IEA] GO_process : GO:0030036 - actin cytoskeleton organization and biogenesis [Evidence IEA]; GO:0007010 - cytoskeleton organization and biogenesis [Evidence IEA] codon_start : 1 note : profilin IV product : profilin family, member 4 protein_id : NP_082652.1

name	0610009D07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384692 CCDS:CCDS25791.1 GeneID:66055 MGI:1913305
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA] codon_start : 1 product : splicing factor 3B, 14 kDa subunit protein_id : NP_079599.1

name	Fkbp1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:123173728 CCDS:CCDS25792.1 GeneID:14226 MGI:1336205
definition	GO_function : GO:0005528 - FK506 binding [Evidence ISS] codon_start : 1 note : FK506 binding protein 1b (12.6 kDa) product : FK506 binding protein 1b protein_id : NP_058559.3

name	BC068281 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27734144 CCDS:CCDS25793.1 GeneID:238037 MGI:3040699
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC238037 protein_id : NP_775592.1

name	Gm1964 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702025 GeneID:432628 MGI:3583946
definition	codon_start : 1 product : hypothetical protein LOC432628 protein_id : NP_001028660.1

name	Ubxd4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703880 CCDS:CCDS25795.1 GeneID:217379 MGI:2442310
definition	codon_start : 1 product : UBX domain containing 4 protein_id : NP_663416.1

name	Atad2b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149262841 GeneID:320817 MGI:2444798
definition	codon_start : 1 product : ATPase family, AAA domain containing 2B protein_id : XP_001480179.1

name	Klhl29 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94392377 GeneID:208439 MGI:2683857
definition	codon_start : 1 product : similar to mKIAA1921 protein protein_id : XP_911312.2

name	LOC100043137 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262845 GeneID:100043137
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480187.1

name	LOC668332 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668332
definition	number : 4 pseudo : _no_value

name	LOC668332 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668332
definition	number : 3 pseudo : _no_value

name	LOC668332 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668332
definition	number : 2 pseudo : _no_value

name	LOC668332 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668332
definition	number : 1 pseudo : _no_value

name	LOC100042095 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042095
definition	number : 2 pseudo : _no_value

name	LOC100042095 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042095
definition	number : 1 pseudo : _no_value

name	LOC672098 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:672098
definition	number : 1 pseudo : _no_value

name	LOC672098 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:672098
definition	number : 2 pseudo : _no_value

name	LOC238049 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:238049
definition	number : 1 pseudo : _no_value

name	EG626534 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149262838 GeneID:626534 MGI:3647156
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 576 ESTs, 8 Proteins product : predicted gene, EG626534 transcript_id : XR_034533.1

name	2810032G03Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149262842 GeneID:72669 MGI:1919919
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 17 ESTs product : RIKEN cDNA 2810032G03 gene transcript_id : XR_035419.1

name	LOC435292 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149262843 GeneID:435292
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 ESTs, 25 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) pseudo : _no_value transcript_id : XR_034553.1

clone name	MSMg01-390E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-194F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-097F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-210B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045A10
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-097F01.T7 (MSMg01no097_f01.b1)	MSMg01-097F01.TJ (MSMg01no097_f01.g1)
ACC	AG313777	AG313778
length	974	835
length of high quality (start - end)	---	172 (140 - 311)
definition	CHROMAT_FILE: MSMg01no097_f01.b1 PHD_FILE: MSMg01no097_f01.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:54:00 2005	CHROMAT_FILE: MSMg01no097_f01.g1 PHD_FILE: MSMg01no097_f01.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:54:00 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	TCACCTCTATTATTTTCTTCCCCCCCTCCTCCTTTTCCTCCCCACTCTTC CTCTTGGGTTTTGCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCA AGAGAGAGGGGCGNAATTNCAGTTTCTTTCCCAAAACACAAAGGTGTGTA TAGTGTGTAGCGCCGCAAAAAGTACCTCCTCCCTGACCCTCTGATCTTTC CTCCCTTACTGTTCATGTGCAGTAGTAATAAGACCCAGAATAGGTAGAAG TAAGAAGCTACGCAGAACCACGCCATTCTACCTAAAGTGCACATTCCCTT ATACCAATCCACATCAAACCAACCACTTTATATCCTTAACACCCAACCCA TTAACCCTCCGCATCATCCACACCTACACCTACAATTTTTAATTCCAATT CACACACATTCCTGTACGTCGTATTTCTCGCCACGCTGTTTTCCTCTGTT CCTTTTACAATCAATAAGCGCGTTATACAACCCGTATATTCCCACTCTAC TCCCCGCCCCATCAAAGACGCCTCTCCAATTTGCTAAACTACACCCGCAT AACTATTAAATGTTACATTTTCGCAAATCGCCCACCAACCCTTCAAATTA TTGTTTCCCATGTCTCAACTCGCCCACGCTTACTCACCCTTACTTTTTTT CGGACCGCCCTATAACACCGCGCCTCTGAAATACGCGCAGGTGAAGAACG CGCATCTAACACGAAATCTCACATTCCCACCCCCCTTATATAACTCTCCC GCGCCTTTACCCGTCCCTAATCTCCCTCATCCCTCCTACATTTTCTTAAT ATCCCACCCGCACCCTCGAGGGGGGATGGAGTCTTCATCGTATATAACGA CTTGATAAGACCACAACTTTTGTCCATTTTTCTCCCCGCGACATAATCAT TGCGTGTGGGCGCCCCCACCCCCCAAGATACACACAACAACTATATGTTG TGTATCCTATCACCGGCGCGCGTC	AAAATATCACAAACTTAAAACCCCTAAATTACTTTCATCCCCCCCACAAC TNNCCTCACAATGCTATGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXCTGAAATTCTGTGGAGACCATGGAGAGTC CCCAGCAGAGGCTGACAGACTAACAGCCCGGCCCACAGTATATAGGTCTA TCCTGGAAGCTAAGGAGCAGTTCTACGTTAAAAAAAGAAAAGGAAAAAAA AGAAAGGAGACAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA GAGAGAGAGGGAGGGACAGGCAGAGAGAGCTCTTCTTCCCCCCCTTACCT TTTTCCCCCTCCGCCACACCTTGGAATTTCTTTTTTCTGTTCCTATTTCC CCCTTTGGGCCCCGCCCTCCTTTTTTTTCCCTACCCCTTCGTGACCCTCA CACATTGTTTAAGTCCGTATACCAACCACTTGTTTATCCCCCCCCCTTCA CTTCCCCACATTGCCATCCTACCCCATACTTTTCGGGGTTCACAAATGTG GAGACCACATCCCCTTTTGTATTTCTTGCGTGTTTTATTGTTTATCAAAA TAGTGGTGTCCCCCCCCTTCTTCCGTTCACTTTTTCCCCCGCCCCTTCCC TCTTTACCCCTCCTCCCATTCTTACCCAACACCCCCCCGGGGGTTTGTTG CCTTTTTCACCCCTCACCCCCCCCGCCACCGCGGGGGTGTTACCACACAC CCCCACTATTGGGGGGGTTTCCTTTTACATTTGCTCCCTTTTTTTCCATT ATGCCCCTTTCTACGTCTTAATATTTCTCCCTCAG
quality values	Open. Hide. 8 8 8 8 8 8 6 6 6 6 6 6 10 9 8 10 8 8 8 8 12 12 10 9 9 9 9 9 11 13 12 9 7 10 8 9 8 8 8 8 8 10 6 6 6 6 6 8 11 8 8 8 8 8 8 8 8 6 6 6 6 10 9 9 9 9 9 12 17 13 13 12 25 25 37 37 25 22 22 25 22 18 13 13 11 19 19 37 17 14 20 14 10 10 18 9 9 9 11 12 10 11 6 8 6 6 6 7 7 10 17 17 3 0 3 21 23 3 0 3 15 15 15 12 8 8 6 6 6 7 6 6 8 13 9 14 15 15 12 12 11 15 15 18 13 11 8 8 6 6 8 8 12 12 14 14 10 12 10 8 8 8 6 8 6 6 6 10 10 10 8 8 8 8 8 8 9 9 9 9 9 10 8 8 8 8 8 8 8 8 6 6 8 6 6 6 6 7 8 13 12 16 9 10 8 9 8 10 8 8 11 11 9 9 9 9 9 9 11 11 10 11 11 11 10 9 9 10 10 10 8 8 8 8 8 8 8 6 6 8 8 11 10 9 9 10 10 10 8 8 8 8 8 9 9 13 13 8 8 8 8 8 8 8 8 8 8 10 10 6 8 8 8 10 9 9 9 8 8 8 8 8 8 8 8 8 6 6 6 6 6 6 6 7 8 7 9 12 10 7 7 6 8 9 7 7 8 8 8 8 8 8 8 8 8 8 8 10 13 11 8 8 8 8 6 6 6 6 8 8 8 8 8 8 9 10 10 9 9 9 9 9 12 8 10 10 8 10 8 8 8 8 8 8 8 10 13 9 9 9 8 8 8 8 8 10 9 8 6 6 6 10 8 8 10 10 8 8 9 9 9 11 10 10 10 10 10 8 10 8 8 8 8 8 8 10 11 11 7 8 6 8 8 8 8 8 8 6 6 8 6 8 8 10 11 11 11 6 8 6 6 8 8 10 11 8 8 8 8 8 8 8 8 8 8 8 8 8 8 9 9 8 8 8 8 8 8 8 8 8 8 8 8 11 7 7 6 6 8 8 11 11 12 15 11 11 10 10 10 10 10 10 11 9 9 9 9 8 8 8 8 8 8 8 8 8 8 6 6 8 8 13 10 13 10 9 9 10 9 9 9 10 8 8 6 6 6 10 13 15 12 10 10 10 10 11 10 15 14 14 12 12 10 12 8 8 7 8 7 7 7 6 8 8 8 10 10 6 6 8 6 8 8 6 8 10 10 8 8 8 10 11 8 8 6 6 7 6 8 6 8 8 11 8 8 8 6 6 10 10 10 9 9 10 10 11 8 8 6 6 8 8 8 8 8 10 12 12 15 15 15 8 10 10 8 8 8 8 8 8 8 8 8 8 10 10 11 11 12 10 10 9 9 9 9 9 9 9 8 10 9 7 8 8 11 8 8 8 8 8 8 10 10 8 6 6 6 8 6 6 8 6 6 8 8 12 9 10 13 12 9 10 9 9 9 10 10 12 10 11 11 12 9 8 8 6 6 8 8 6 6 8 15 12 8 8 8 10 10 9 9 9 9 9 8 8 10 10 8 8 9 8 8 8 8 8 8 6 6 7 6 8 8 8 8 8 8 11 8 8 6 6 8 8 8 8 7 6 10 8 8 8 8 8 19 21 13 15 8 8 8 11 11 11 8 8 8 8 10 10 11 11 13 11 15 11 11 8 11 8 8 8 8 8 10 9 9 9 9 8 8 11 11 10 11 11 9 9 9 9 9 9 8 8 8 6 7 10 11 10 9 9 10 10 11 8 6 7 7 8 8 8 11 8 8 8 8 9 9 9 9 9 11 14 11 11 8 8 8 8 6 6 6 10 8 8 8 6 6 6 7 6 10 8 9 9 10 10 10 10 10 10 15 12 12 8 8 8 10 8 8 13 8 8 8 8 8 10 8 8 8 10 10 12 12 10 12 8 8 8 8 6 6 8 8 10 10 10 10 10 10 10 9 10 10 12 10 9 12 8 8 10 10 11 10 12 10 10 8 6 6 6 6 6 6 6 6 8 8 10 8 8 8 10 8 8 8 10 10 10 9 9 9 9 9 13 10 9 10 11 22 21 30 12 12 6 6 6 6 6 6 8 8 8 8 6 6 7 7 10 10 8 8 8 8 8 9 9 9 9 8 6 6 6 11 11 13 6 6 6 6 8 8 8 8 8 8 11 8 8 8 8 8 8	Open. Hide. 10 10 10 10 9 9 9 8 8 8 8 8 8 8 8 8 8 8 8 10 10 8 10 6 6 6 6 9 9 6 6 6 6 6 6 8 8 8 8 11 19 23 9 9 7 6 6 8 8 11 3 0 0 3 7 8 6 6 6 6 7 10 9 8 8 10 10 15 15 9 9 9 14 20 22 28 26 26 37 37 37 31 32 39 39 25 25 11 7 7 7 8 8 8 9 9 8 8 8 8 8 11 25 23 27 15 15 15 30 29 47 47 27 27 10 9 9 9 8 8 8 6 6 6 10 13 11 11 14 12 19 12 21 24 34 26 19 10 12 12 19 21 39 39 37 30 30 32 32 39 40 39 37 32 33 43 43 48 43 43 36 28 28 33 28 28 28 31 30 24 24 30 22 25 19 17 8 8 8 10 13 13 28 34 32 32 28 23 23 34 34 43 48 44 44 39 39 39 47 40 47 39 25 24 12 12 15 25 27 43 39 42 37 30 30 33 37 43 48 57 57 47 47 36 36 23 23 23 36 36 25 26 26 30 36 24 19 15 15 15 20 32 32 27 27 27 28 28 31 33 42 32 36 29 30 21 32 16 18 11 12 12 19 18 18 23 36 36 47 43 47 44 44 42 42 24 24 13 18 13 18 18 36 36 32 28 32 25 25 23 36 23 20 20 20 20 28 20 21 21 31 32 33 37 39 30 30 23 18 14 18 15 24 15 15 11 11 11 21 18 21 14 14 13 12 12 9 12 8 8 8 8 8 9 12 18 12 12 9 8 8 8 12 12 13 8 6 6 8 11 9 10 13 15 10 10 10 10 12 11 11 10 8 8 6 6 6 6 6 8 8 8 8 8 8 10 11 11 11 11 11 9 9 10 8 8 8 6 6 6 8 6 6 8 8 8 8 9 9 9 11 19 21 15 12 12 12 15 9 9 8 8 8 8 8 10 8 8 8 8 8 8 8 19 22 19 17 15 19 15 15 15 15 15 19 12 8 8 8 8 8 8 10 10 10 10 11 11 11 11 11 10 10 10 10 10 11 8 8 8 8 8 6 6 8 8 8 8 6 6 8 8 9 9 9 8 8 8 8 8 8 10 10 8 8 8 8 8 8 10 11 15 16 10 9 12 8 8 8 8 8 8 10 9 10 10 8 8 8 8 8 11 10 11 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 8 9 9 9 11 10 10 10 10 10 10 10 10 9 8 8 10 10 10 10 8 8 8 8 8 8 8 8 8 8 11 14 16 22 21 15 15 10 11 11 11 11 15 15 15 17 11 11 10 10 10 11 12 12 12 11 10 10 10 9 8 11 6 6 8 6 9 8 8 8 8 8 8 8 8 8 9 9 9 12 11 15 16 13 15 15 8 8 8 8 8 10 11 6 6 8 8 8 8 8 12 12 15 11 11 11 16 8 8 8 8 10 10 12 12 10 10 8 8 8 9 9 8 8 10 11 17 17 24 23 24 19 17 17 9 9 9 6 8 8 9 10 11 11 12 11 11 8 8 8 8 8 8 21 26 13 7 6 6 8 8 10 10 10 10 9 11 8 10 10 11 12 12 16 13 8 9 8 6 6 8 8 8 8 7 6 7 7 11 19 20 18 18 13 12 11 10 10 10 7 7 8 10 9 15 11 10 9 11 11 11 11 9 8 8 8 8 8 10 8 11 13 9 9 10 13 9 8 10 10 12 23 22 11 11 11 12 9 8 8 8 8 10 10 8 11 11 12 12 11 15 10 10 10 10 10 13 9 9 12 15 23 20 15 8 10 8 8 8 8 8 8 8 8 11 7 6 6 8 8 8 10 10 11 12 11 8 8 8 8 8 8 8 8 10 9 9 8 8 13 7 7 7 8 7

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no097_f01.g1 MSMg01no097_f01.g1 CHROMAT_FILE:
MSMg01no097_f01.g1 PHD_FILE: MSMg01no097_f01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:54:00 2005
         (172 letters)



>mm_chr12_5404522_5405093
          Length = 572

 Score =  238 bits (123), Expect = 1e-67
 Identities = 159/173 (91%), Gaps = 5/173 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   catggagagtccccagcagaggctgacagactaacagcccggcccacagtatataggtct 60
           ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||
Sbjct: 317 catggagagtccccagcagaggctgacagactaacagcaaggcccacagtatataggtct 258

                                                                       
Query: 61  atcctggaagctaaggagcagttctacgttaaaaaaagaaaaggaaaaaaaa----gaaa 116
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||    ||||
Sbjct: 257 atcctggaagctaaggagcagttctacgttaaaaaaaaaaaaggaaaaaaaaaaaagaaa 198

                                                                
Query: 117 ggagacagggagagagagagagagagagagagagagagagagagagagagaga 169
           ||||| |||||||||||||||||| | | | ||| ||||| ||||||||||||
Sbjct: 197 ggagagagggagagagagagagaggggggg-gagggagagggagagagagaga 146


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 172
Length of database: 572
Length adjustment: 8
Effective length of query: 164
Effective length of database: 564
Effective search space:    92496
Effective search space used:    92496
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information