Query= MSMg01no098_i05.b1 MSMg01no098_i05.b1 CHROMAT_FILE:
MSMg01no098_i05.b1 PHD_FILE: MSMg01no098_i05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:39 2005
(434 letters)
>mm_chr12_34001074_34001907
Length = 834
Score = 772 bits (399), Expect = 0.0
Identities = 423/431 (98%), Gaps = 2/431 (0%)
Strand = Plus / Plus
Query: 5 gaattcagcattcacgtattctcaatattaggaatgccagtcagtcatagacctcaaaga 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagcattcaggtattctcaatattaggaatgccagtcagtcatagacctcaaaga 264
Query: 65 tgtccaggattgtgtctcccacttgccagcatctggcttcacctgtcccttctgtgtgcc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgtccaggattgtgtctcccacttgccagcatctggcttcacctgtcccttctgtgtgcc 324
Query: 125 ttggttaaggatgagttcaactatgcctatttacggtgagctcagtggtttatccaaaac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttggttaaggatgagttcaactatgcctatttacggtgagctcagtggtttatccaaaac 384
Query: 185 caggaagctaccagagccatggcgactcttgaccaacttgcagtgtgtatccagtagaac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caggaagctaccagagccatggcgactcttgaccaacttgcagtgtgtatccagtagaac 444
Query: 245 aggaagatgcctatggaggctaatacagaactagtgggcccct-tggcaacctaccactg 303
||||||||||||||||||||||||||||||| |||||| || | ||||||||||||||||
Sbjct: 445 aggaagatgcctatggaggctaatacagaacaagtggggcc-tgtggcaacctaccactg 503
Query: 304 cctggttgagacacaggaacagctaaggcaatgaaaagccttcttctgtttatttgaatg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cctggttgagacacaggaacagctaaggcaatgaaaagccttcttctgtttatttgaatg 563
Query: 364 ttgccgctttgagatagacttactatgtaacctagtctggtctccaactcgcaatcctcc 423
||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ttgttgttttgagatagacttactatgtaacctagtctggtctccaactcgcaatcctcc 623
Query: 424 tgcctcagttt 434
|||||||||||
Sbjct: 624 tgcctcagttt 634
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 834
Length adjustment: 9
Effective length of query: 425
Effective length of database: 825
Effective search space: 350625
Effective search space used: 350625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no098_i05.g1 MSMg01no098_i05.g1 CHROMAT_FILE:
MSMg01no098_i05.g1 PHD_FILE: MSMg01no098_i05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:39 2005
(244 letters)
>mm_chr12_34153851_34154494
Length = 644
Score = 437 bits (226), Expect = e-127
Identities = 242/252 (96%), Gaps = 8/252 (3%)
Strand = Plus / Minus
Query: 1 aagactagccgaagctacttaatatgctcattcctcaaaaacagaaaacggatagagaaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 360 aagactagccgaagctacttaatatgctcattcctcaaaaacagaaaacggagagagaaa 301
Query: 61 acaataagaaaggtgttagtagtctttgggtgtggtttgggttggcaattggaaagttta 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 300 acaataagaaaggtgttagtagtctttgggtgtggattgggttggcaattggaaagttta 241
Query: 121 attttctctagaggcaaagttggatgaaaaaaaaaaaaaa--------caagaacaagaa 172
|||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 240 attttctctagaggcaaagttggatgaaaaaaaaaaaaaaaaaaaaaacaagaacaagaa 181
Query: 173 tgcatttgccaagaggaaacataagaaattaaatttccagccaggcatggtggtgcacgc 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 tgcatttgccaagaggaaacataagaaattaaatttccagccaggcatggtggtgcacgc 121
Query: 233 ctttaatcccag 244
||||||||||||
Sbjct: 120 ctttaatcccag 109
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
