CTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAATCCGCGGA
ATTCCTGTCCTTCCCCAGAACGCCTCCACAAGCTCATTCATGAGCTTTTC
TCCTTCCCTAGTGTTAAAAGACCAAAAATGCTAGCCTGTGAGCAACTATT
TAAGCAGGTCATCTAATATTAAAATTCCCTGCTTCAAACTGCTTTAATGA
CTTTACATGCACATTGTGACCATATTCAAACTTAAGCTTATTTATTGTGC
TTTTGAAAACCTCAAACACGTAGGTATCTGGCATTGAAGTGGCTGTTTAC
TTCAGCAAGTTACACGGGCAACCAAATGAATCTGCCTTCTTCACTCCTCA
TCTATGGTAGACTTTCTTTCCAACGCTCAGCCATACAGTCACTCTGGTCA
CCTGCCAGTGTGCCACAGCACTGAAGTCCTATCCCTCCGCCTGAGCATAG
CCTCCAGCTTGAGGCGAGCCAAGGGCAGGACTTGTTCCCTGGATGAATGT
ACTCTTGAAACTTTTTTCGCATCATGGGCTGTGTCTCTACAAGGAGGGAT
CTGGGGTTCACTGGATGGGTCAAGCTCAAACAGGTCTGACACTGCACAAT
GGCAACATGAAAGTCAAGAGTTGCCTACTCAGCAGCTGTGGGCATTAGCC
GAATCGGCTGAGGTTATCTGCCCTCTCCACCTTGGCTCTCAGTGAGAAAG
GAAGTCAN

CGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCATAGCAGGGCCCAGTTGGCCCTGTT
GCTATGATGCTAGGCCTGCTTGTGTGAGGATTTGAATTTGGATCTCTTGA
ACCAAGTACAGTATGTCTGCAGCCCCTGCGTACAGAATTCACGGGATTCA
TGGGAGCTCGGGGGCCAGCTAGCCTGTCGCTGGTGGCTCGCTTCCTTTCC
TTGTCTCTGACCTCTCACCCACTGCCCTTGAGAATTTGAGGCTGGAATTT
CCCAACATGTGGAAGTCTCATTCAGGAAATCTCCCCAGTTCCTCCCCAGC
AGCCCTGCACCCAAACCAAGCAGGGCGGATCCCTGAAGCAGGGGTGAGCA
GATTGTTTGGTTCCGGGCCAGAGGGATAACTATTTTGAGCTTATGTTTTG
TTTACTTGGCAATCTTTAAAAATATGTGTATGCTTGTTCCTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCCTCTCAGTCCCACATCT
TTCCTTTTCCCCCAGTATTCTACTGTTTTTTGCCGCTGCTCTTTCCGCTG
TCTTTTCTCATATCCTTTTTCATGTCTCTTCTTTCCTCCTCTTTCCGCCT
CCTCGTTCCCTCCCCTATTTTTTACTCCTTACCTCCCCTCCTAGCACTCC
TGCTACTTCTATATTTACTAGGTCCACCCTCTTTTCTTTTTTTCCN

Query= MSMg01no112_b01.b1 MSMg01no112_b01.b1 CHROMAT_FILE:
MSMg01no112_b01.b1 PHD_FILE: MSMg01no112_b01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:17:06 2005
         (591 letters)



>mm_chr12_26904556_26905546
          Length = 991

 Score = 1133 bits (586), Expect = 0.0
 Identities = 586/586 (100%)
 Strand = Plus / Plus

                                                                       
Query: 6   ggaattcctgtccttccccagaacgcctccacaagctcattcatgagcttttctccttcc 65
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ggaattcctgtccttccccagaacgcctccacaagctcattcatgagcttttctccttcc 265

                                                                       
Query: 66  ctagtgttaaaagaccaaaaatgctagcctgtgagcaactatttaagcaggtcatctaat 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ctagtgttaaaagaccaaaaatgctagcctgtgagcaactatttaagcaggtcatctaat 325

                                                                       
Query: 126 attaaaattccctgcttcaaactgctttaatgactttacatgcacattgtgaccatattc 185
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 attaaaattccctgcttcaaactgctttaatgactttacatgcacattgtgaccatattc 385

                                                                       
Query: 186 aaacttaagcttatttattgtgcttttgaaaacctcaaacacgtaggtatctggcattga 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 aaacttaagcttatttattgtgcttttgaaaacctcaaacacgtaggtatctggcattga 445

                                                                       
Query: 246 agtggctgtttacttcagcaagttacacgggcaaccaaatgaatctgccttcttcactcc 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 agtggctgtttacttcagcaagttacacgggcaaccaaatgaatctgccttcttcactcc 505

                                                                       
Query: 306 tcatctatggtagactttctttccaacgctcagccatacagtcactctggtcacctgcca 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tcatctatggtagactttctttccaacgctcagccatacagtcactctggtcacctgcca 565

                                                                       
Query: 366 gtgtgccacagcactgaagtcctatccctccgcctgagcatagcctccagcttgaggcga 425
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gtgtgccacagcactgaagtcctatccctccgcctgagcatagcctccagcttgaggcga 625

                                                                       
Query: 426 gccaagggcaggacttgttccctggatgaatgtactcttgaaacttttttcgcatcatgg 485
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 gccaagggcaggacttgttccctggatgaatgtactcttgaaacttttttcgcatcatgg 685

                                                                       
Query: 486 gctgtgtctctacaaggagggatctggggttcactggatgggtcaagctcaaacaggtct 545
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 gctgtgtctctacaaggagggatctggggttcactggatgggtcaagctcaaacaggtct 745

                                                         
Query: 546 gacactgcacaatggcaacatgaaagtcaagagttgcctactcagc 591
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 gacactgcacaatggcaacatgaaagtcaagagttgcctactcagc 791


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 991
Length adjustment: 10
Effective length of query: 581
Effective length of database: 981
Effective search space:   569961
Effective search space used:   569961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no112_b01.g1 MSMg01no112_b01.g1 CHROMAT_FILE:
MSMg01no112_b01.g1 PHD_FILE: MSMg01no112_b01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:17:06 2005
         (442 letters)



>mm_chr12_27040886_27041727
          Length = 842

 Score =  847 bits (438), Expect = 0.0
 Identities = 441/442 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   catagcagggcccagttggccctgttgctatgatgctaggcctgcttgtgtgaggatttg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 catagcagggcccagttggccctgttgctatgatgctaggcctgcttgtgtgaggatttg 557

                                                                       
Query: 61  aatttggatctcttgaaccaagtacagtatgtctgcagcccctgcgtacagaattcacgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 aatttggatctcttgaaccaagtacagtatgtctgcagcccctgcgtacagaattcacgg 497

                                                                       
Query: 121 gattcatgggagctcgggggccagctagcctgtcgctggtggctcgcttcctttccttgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gattcatgggagctcgggggccagctagcctgtcgctggtggctcgcttcctttccttgt 437

                                                                       
Query: 181 ctctgacctctcacccactgcccttgagaatttgaggctggaatttcccaacatgtggaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ctctgacctctcacccactgcccttgagaatttgaggctggaatttcccaacatgtggaa 377

                                                                       
Query: 241 gtctcattcaggaaatctccccagttcctccccagcagccctgcacccaaaccaagcagg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gtctcattcaggaaatctccccagttcctccccagcagccctgcacccaaaccaagcagg 317

                                                                       
Query: 301 gcggatccctgaagcaggggtgagcagattgtttggttccgggccagagggataactatt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gcggatccctgaagcaggggtgagcagattgtttggttccgggccagagggataactatt 257

                                                                       
Query: 361 ttgagcttatgttttgtttacttggcaatctttaaaaatatgtgtatgcttgttcctgtg 420
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 256 ttgagcttatgttttgtttacttggtaatctttaaaaatatgtgtatgcttgttcctgtg 197

                                 
Query: 421 tgtgtgtgtgtgtgtgtgtgtg 442
           ||||||||||||||||||||||
Sbjct: 196 tgtgtgtgtgtgtgtgtgtgtg 175


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 842
Length adjustment: 9
Effective length of query: 433
Effective length of database: 833
Effective search space:   360689
Effective search space used:   360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)