TCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCAAGTTTATAGCCATCTTGGCCAATTAGTGATATTCTGTTTCAAAA
TGCAAAGTAGAATGATGGTTGGAGATGTGGCTGAGTGATAGAGCTCTTAC
CCAGCATGTACTTGAAACGTAGGTTTATACTGCAAGAACTACAGAAGGAA
AAACAAAGACATTTGGTTTTAAAAAAAAAGAAAGAAGGAAGAAAAGGGAA
AAATATTCCATTGTTCTGGAAAACTAATAGATAAATACTTTTCTAAAGTT
AGTAGATGAGCTATTAACTATAACATTTATTTTAAAACATCATAATAGCT
TATATAGAAATACTTTTTAAGCTCTTATGAAGCTTTGTATTTGCCCATTT
AGTCTTCTAAACTATCCGAGTCAGTTTTCCAGAACAATGAAATGTTTTTT
TTCCTTTCTTTGTTTCTTTTTCAGGAAACAACTATATCAGGCTCTGTCAC
CAAGCACTTGTTGGCATCCACAACTGTGTCTGGGTTTGATGATTACTTAT
GGGATGGACCACAGGTGCGGCAGTCTCTGGACGGTCCTTCCTTCTGTCTC
TGCTCCGAACTTTGCCTCTGTAACTCCTCCGGTGGGTATTTTGCTCCCCC
TTCTAAGAAGATGCGAAGTATCCACACTTTGGGTTTCCTTCTTCTTGAGT
TTCATGCGTTTTACAAATTGTATCTTGGGTATTCTAAGTTTCTGGGCCAA
T

TTTTCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXAGTTTGCTAGGATTTTATTGAGT
CTTTTTGCATGGATATTCATAAGGGAAATTGATCTGAAGTACTCTTCTTT
TGTTGGATCTTTGTGTAATTGTGGCTTCATAGAATGAATTGTGTAGAGTA
ACTTCTGTTTATATTTTGTGGAATAGTTTGAGGAGAGTTGGAATTAGGTC
TTCTTTGAAGGTCTGATAGAACTCTGCACTAAACCCATCTGGTACTGGGC
TTTTTTTGGTTGGGAGACTATTAATGACTGCTTCTATTTCTTTAGGGGAA
ATGGGACTGTTAAGATCATTAATCTGATCCTAATTTAACCTGGTATCTGT
CTAGGAAGTTATCCATTTCATCCAGGTTTTCCAGTCTTGTTGAGTATAGC
CTTTTGTAATAGGATCTGATGATGATTTGGGTTTCCTCAGGATCTGTTAT
GTCTCCTTTTTCATTTCTGATTTTGTTAATTAGGATACTGTCCCTGTTGC
CTCTAGTTAGTCTGGCTAAGGGTTTATCTATCTTGTTGATTTTCTCAAAG
AATCAGCTCCTGTTTTGGTTGATTCTTTGGCACAGTTCTTTTCGCTTCTA
CTCCGTTTGACTTCACCCCTATATTTGATTATTTCCCTACCATTTATTCT
TCTTGCCCAAATTTGTTTCCTTT

Query= MSMg01no115_o17.b1 MSMg01no115_o17.b1 CHROMAT_FILE:
MSMg01no115_o17.b1 PHD_FILE: MSMg01no115_o17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:22:00 2005
         (573 letters)



>mm_chr12_51902612_51903582
          Length = 971

 Score = 1062 bits (549), Expect = 0.0
 Identities = 567/573 (98%), Gaps = 2/573 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttggccaattagtgatattctgtttcaaaatgcaaagtagaatgatggttggagatgtgg 60
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 ttggtcaattagtgatattctgtttcaaaatgcaaagtagaatgatggttggagatgtgg 537

                                                                       
Query: 61  ctgagtgatagagctcttacccagcatgtacttgaaacgtaggtttatactgcaagaact 120
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 536 ctgagtgatagagctcttacccagcatgtacttgaaatgtaggtttatactgcaagaact 477

                                                                       
Query: 121 acagaaggaaaaacaaagacatttggttttaaaaaaaaagaaagaaggaagaaaagggaa 180
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 476 acagaaggaaaaacaaagacatttggtttt-aaaaaaaagaaagaaggaagaaaagggaa 418

                                                                       
Query: 181 aaatattccattgttctggaaaactaatagataaatacttttctaaagttagtagatgag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 aaatattccattgttctggaaaactaatagataaatacttttctaaagttagtagatgag 358

                                                                       
Query: 241 ctattaactataacatttattttaaaacatcataatagcttatatagaaatactttttaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 ctattaactataacatttattttaaaacatcataatagcttatatagaaatactttttaa 298

                                                                       
Query: 301 gctcttatgaagctttgtatttgcccatttagtcttctaaactatccgagtcagttttcc 360
           |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 297 gctcttatgaagctttgtatttgcccatttagtcttctaaactatctgagtcag-tttcc 239

                                                                       
Query: 361 agaacaatgaaatgttttttttcctttctttgtttctttttcaggaaacaactatatcag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 agaacaatgaaatgttttttttcctttctttgtttctttttcaggaaacaactatatcag 179

                                                                       
Query: 421 gctctgtcaccaagcacttgttggcatccacaactgtgtctgggtttgatgattacttat 480
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 178 gctctgtcaccaagcacttgttggcatccacaactgtgtctgggtttggtgattacttat 119

                                                                       
Query: 481 gggatggaccacaggtgcggcagtctctggacggtccttccttctgtctctgctccgaac 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 gggatggaccacaggtgcggcagtctctggacggtccttccttctgtctctgctccgaac 59

                                            
Query: 541 tttgcctctgtaactcctccggtgggtattttg 573
           |||||||||||||||||||||||||||||||||
Sbjct: 58  tttgcctctgtaactcctccggtgggtattttg 26


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 971
Length adjustment: 10
Effective length of query: 563
Effective length of database: 961
Effective search space:   541043
Effective search space used:   541043
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)