NNNNCCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGGACCGC
GGAATTCATTGTTTTTCCACTTGAGTAGTACTCCATTGTGTAAATGTATC
ACATTTCTACATCTATTCCTCTGTTGAGGGACATCTGGGTTCTTTTCAGC
TTCTTGGTATTATAAATAAGGCTGCTATGAGCATAGTGGAACATGTGTAA
TTATTACAAGTTGCAGCATTTTCTGGGTATATGTCCAGGAGTGGTATTGC
TGGATCTTCCGGTAGAACTATGTCCAATTTTCTGAGGAACTGTCAAACTG
ATTTCCACAGTGGTTGTACCAGTTTGCAATCACACCAGTAGTGGAGGATT
GATCCTCTTTCTCCACATCCTTGCCAGCATCTGTTGTCATTTGAGTTTTT
GATCTTAGCCATTCTGACTGGTGTGAGCTGGAATCTCAGGGTTGTTTCAA
TTTGCATTTCCTTGATGATTAAGTATATTGAACATTTTTTTTAGGTGCTT
CTCAGCTATTCGGTATTCCTCAGTTGAAAATTCTTTGTTTAGCTCTGTAC
CCCCCATTTTTAAAAAGGGATATTTGGTTTTCTAGAGTCCAATTTATATA
TATATATACATTGGATATTAGCCCCTATCCGATTTAGGATTGGTAAAGAT
CTTTTCCCAATCCGTTGTTTGCCGTTTTGCCTTATT

NNNNNCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTCTAAATATTCCCTATCATT
TGTAATGTTATATATACCAATTTCATTGTTTAATGTGTTTAATATCCATT
TGTGCTAGCTACTTAACTTTACATTAATATTCTCCCTGCTTTCACAATAA
TCTCCTTCAGGGTTACATTGTCCCTGATTAAGCCTGTTCAGTATTACCTT
TCTTGGCATGTTGTGTGAATGGAGCAGTACATTGTGAGCAACACATTATT
GGCTTCTCTCAGGATGTTTAAAAATTCACTCAGGTTGTAAATAAAAATGA
AAAAATAATAAAATTTCATTTTCTTCTATTGAGTGCATATAATGCAAATT
TTAGTTCTATCAGTAGTCGGGCATTTACTTTTCTAATTAGTAGCAATGTT
CCTTTAAACCATTAAGTGGAATTTAAGTAGAAATAATTTTAGGGATTGTT
TTTTTTTTTTTAACTACGAATGGAACAGCTAAGTTACACTTATATTTTAC
TTTTCAGAACTACTAATAGGGGACTCCACACTCACTGAATCATGTTAGAG
TCACATGAACAATGAATGAGGGTTCTAATTTTGTTACATAAAATTGTAAT
TGTCTGAATCTCAACAATGCATTTTACCTTCCCAGGGAACA

Query= MSMg01no120_g01.g1 MSMg01no120_g01.g1 CHROMAT_FILE:
MSMg01no120_g01.g1 PHD_FILE: MSMg01no120_g01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:27:47 2005
         (570 letters)



>mm_chr12_49211779_49212748
          Length = 970

 Score = 1023 bits (529), Expect = 0.0
 Identities = 562/575 (97%), Gaps = 5/575 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctctaaatattccctatcatttgtaatgttatatataccaatttcattgtttaatgtgt 60
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 tctctaaatattccctatcatttgtaatgttatatataccaattttattgtttaatgtgt 260

                                                                       
Query: 61  ttaatatccatttgtgctagctacttaactttacattaatattctccctgctttcacaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaatatccatttgtgctagctacttaactttacattaatattctccctgctttcacaat 320

                                                                       
Query: 121 aatctccttcagggttacattgtccctgattaagcctgttcagtattacctttcttggca 180
           |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 aatctccttcagggttacgttgtccctgattaagcctgttcagtattgcctttcttggca 380

                                                                       
Query: 181 tgttgtgtgaatggagcagtacattgtgagcaacacattattggcttctctcaggatgtt 240
           |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 381 tgttgtgtgaatggagcagtacattgtgagcaacaccttattggcttttctcaggatgtt 440

                                                                       
Query: 241 taaaaattcactcaggttgtaaataaaaatgaaaaaataataaaatttcattttcttcta 300
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 441 taaaaattcactcaggttgtaaataaaaatgaaaaaataataaaatttaattttcttcta 500

                                                                       
Query: 301 ttgagtgcatataatgcaaattttagttctatcagtagtcgggcatttacttttctaatt 360
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 501 ttgagtgcatataatgcaaattttagttctatcagtagtcaggcatttacttttctaatt 560

                                                                       
Query: 361 agtagcaatgttcctttaaaccattaagtggaatttaagtagaaataattttagggattg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agtagcaatgttcctttaaaccattaagtggaatttaagtagaaataattttagggattg 620

                                                                       
Query: 421 ttttttttttttt----aactacgaatggaacagctaagttacacttatattttact-tt 475
           |||||||||||||    |||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 621 ttttttttttttttttcaactacgaatggaacagctaagttacacttatattttactgtt 680

                                                                       
Query: 476 tcagaactactaataggggactccacactcactgaatcatgttagagtcacatgaacaat 535
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 681 tcagaactactaataggggactccacactcactgaaccatgttagagtcacatgaacaat 740

                                              
Query: 536 gaatgagggttctaattttgttacataaaattgta 570
           |||||||||||||||||||||||||||||||||||
Sbjct: 741 gaatgagggttctaattttgttacataaaattgta 775


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 970
Length adjustment: 10
Effective length of query: 560
Effective length of database: 960
Effective search space:   537600
Effective search space used:   537600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)