Query= MSMg01no123_j06.b1 MSMg01no123_j06.b1 CHROMAT_FILE:
MSMg01no123_j06.b1 PHD_FILE: MSMg01no123_j06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:33:30 2005
(274 letters)
>mm_chr12_47768665_47769338
Length = 674
Score = 530 bits (274), Expect = e-155
Identities = 274/274 (100%)
Strand = Plus / Plus
Query: 1 tgagaaggggggttgtctgctttctctggaagctctgtgagagtcttcccatctcagacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgagaaggggggttgtctgctttctctggaagctctgtgagagtcttcccatctcagacc 260
Query: 61 tttctctgcactacactgttgagacagcttgaccccaaaatagaagtttaaactgtttac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttctctgcactacactgttgagacagcttgaccccaaaatagaagtttaaactgtttac 320
Query: 121 tgaccaaaccctctggtgtctattttctggtatgcacaaccactcaccaatgatgcttta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaccaaaccctctggtgtctattttctggtatgcacaaccactcaccaatgatgcttta 380
Query: 181 atacacagaaaaagtaatttagggcataaccattggctttggacttttaagagtctcagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atacacagaaaaagtaatttagggcataaccattggctttggacttttaagagtctcagg 440
Query: 241 cacagctgacagatgaagctctgttagtgcaaga 274
||||||||||||||||||||||||||||||||||
Sbjct: 441 cacagctgacagatgaagctctgttagtgcaaga 474
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 674
Length adjustment: 9
Effective length of query: 265
Effective length of database: 665
Effective search space: 176225
Effective search space used: 176225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no123_j06.g1 MSMg01no123_j06.g1 CHROMAT_FILE:
MSMg01no123_j06.g1 PHD_FILE: MSMg01no123_j06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:33:30 2005
(331 letters)
>mm_chr12_47937012_47937745
Length = 734
Score = 538 bits (278), Expect = e-157
Identities = 319/334 (95%), Gaps = 7/334 (2%)
Strand = Plus / Minus
Query: 1 acttttctgccctcaaatttttagcaatctcttgcctctgcctatagacttgtaagtcaa 60
|||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 532 acttgtctgccctcaaattttcagcaatctctt-cctctgcctatagacttgtaagtcaa 474
Query: 61 gagggttagaggcatgtcctgttaccacatgttttttaggtgttatg-aaaaaatgtaaa 119
|||||||||||||||||||| |||||||||| ||||||||||||||| ||||||| ||||
Sbjct: 473 gagggttagaggcatgtccttttaccacatg-tttttaggtgttatgaaaaaaatttaaa 415
Query: 120 tgagcatttgtttataaagcaacagatttaggcttaatttatttattcaactccactgaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 tgagcatttgtttataaagcaacagatttaggcttaatttatttattcaactccactgaa 355
Query: 180 aggaattacagtaggattttccttcc---cttatgtatatttcataatattttcaaacta 236
|||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 354 aggaattacagtaggaatttccttcccttcttatgtatatttcataatattttcaaacta 295
Query: 237 ttctctaggaagtcagaattaaaagaatcctcaaacacagtttattaattccttgttttg 296
||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 294 ttctctaggaaatgagaattaaaagaatcctcaaacacagtttaataattccttgttttg 235
Query: 297 gatttataagatctagaaaa-tgaaacagttggg 329
|||||||||||||||||||| |||||||||||||
Sbjct: 234 gatttataagatctagaaaattgaaacagttggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 331
Length of database: 734
Length adjustment: 9
Effective length of query: 322
Effective length of database: 725
Effective search space: 233450
Effective search space used: 233450
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
