Query= MSMg01no124_o05.b1 MSMg01no124_o05.b1 CHROMAT_FILE:
MSMg01no124_o05.b1 PHD_FILE: MSMg01no124_o05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:36:35 2005
(607 letters)
>mm_chr12_37673072_37674078
Length = 1007
Score = 1143 bits (591), Expect = 0.0
Identities = 603/607 (99%), Gaps = 1/607 (0%)
Strand = Plus / Plus
Query: 1 tatatctatcctcagagtcctacaggccagtagctccttactaattgttctatgtcatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatatctatcctcagagtcctacaggccagtagctccttactaattgttctatgtcatct 260
Query: 61 cataagcactttagatgatatcagaaaaacaggagatggataagtgagaatagaaagcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cataagcactttagatgatatcagaaaaacaggagatggataagtgagaatagaaagcat 320
Query: 121 taattaacttcatctccttttgatagaaattttcatgccaaggttaatgtatactgatcc 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taattaacttcatctcctttcgatagaaattttcatgccaaggttaatgtatactgatcc 380
Query: 181 taaaatctgtatcaggataatgtcatgaaaatatgctaagtagaacttgaaatttttaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taaaatctgtatcaggataatgtcatgaaaatatgctaagtagaacttgaaatttttaag 440
Query: 241 gaatatcccttggtgttttttcttctctgttaaaaatagggaagacatgtactttagaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaatatcccttggtgttttttcttctctgttaaaaatagggaagacatgtactttagaat 500
Query: 301 gttaactaatttattatgtgtatatatgtgttttatttgcatgtatgtctataagccaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gttaactaatttattatgtgtatatatgtgttttatttgcatgtatgtctataagccaca 560
Query: 361 tgcaggcctagtgcctagtgcttagggacatggatactctggaactgaccttagaaacag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgcaggcctagtgcctagtgcttagggacatggatactctggaactgaccttagaaacag 620
Query: 421 ttctaagtttccacactggtgcaatgagttgaatcttggtcctccagaagagctgtcagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttctaagtttccacactggtgcaatgagttgaatcttggtcctccagaagagctgtcagt 680
Query: 481 actttatcactgagcgacctctctagctccaaattttgaattttaaaacataggaggttg 540
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 681 actttatcactgagcgacctctctagctccaaattttgaattttaaaacatacgaggttg 740
Query: 541 ctggctcacagaaattaaaaacaatcgattgacattaaattgtgtcaagtgaaaccatta 600
|||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 741 ctggttcacagaaattaaaaacaatcgat-gacattaaattgtgtcaagtgaaaccatta 799
Query: 601 tattctt 607
|||||||
Sbjct: 800 tattctt 806
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1007
Length adjustment: 10
Effective length of query: 597
Effective length of database: 997
Effective search space: 595209
Effective search space used: 595209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no124_o05.g1 MSMg01no124_o05.g1 CHROMAT_FILE:
MSMg01no124_o05.g1 PHD_FILE: MSMg01no124_o05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:36:35 2005
(332 letters)
>mm_chr12_37829848_37830579
Length = 732
Score = 584 bits (302), Expect = e-171
Identities = 323/330 (97%)
Strand = Plus / Minus
Query: 1 actaatgcaatgttggcatcactataggttattcttctgtgtttttgtttttgtacttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 actaatgcaatgttggcatcactataggttattcttctgtgtttttgtttttgtacttca 471
Query: 61 tccatttgtagactattcttaagttactctcccacttggagcttggtttatgaatcaaat 120
|| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 470 tcaatttgtagactattcttaagttactctcccacttagagcttggtttatgaatcaaat 411
Query: 121 cactaaaatctgtgctttaaccatattaatatagttctactcagatatttaatactcact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 410 cactaaaatctgtgctttaaccatattaatatagttctactcagatatttaatcctcact 351
Query: 181 ctaagtttatactgagaggctcaatacctcacataaactggttttcatagatgccattat 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 ctaaatttatactgagaggctcaatacctcacataaactggttttcatagatgccattat 291
Query: 241 ttttatttataggcataaaacaaaaggttgtacattctttttctaaatcaaatgggaagt 300
||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||
Sbjct: 290 ttttatttataggcataaaacaaaaggttgtacattcatgttctaaatgaaatgggaagt 231
Query: 301 aagggccaagtacacaatttcttttataac 330
||||||||||||||||||||||||||||||
Sbjct: 230 aagggccaagtacacaatttcttttataac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 732
Length adjustment: 9
Effective length of query: 323
Effective length of database: 723
Effective search space: 233529
Effective search space used: 233529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
