Query= MSMg01no127_i17.b1 MSMg01no127_i17.b1 CHROMAT_FILE:
MSMg01no127_i17.b1 PHD_FILE: MSMg01no127_i17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:40:19 2005
(406 letters)
>mm_chr12_6349479_6350284
Length = 806
Score = 687 bits (355), Expect = 0.0
Identities = 388/399 (97%)
Strand = Plus / Minus
Query: 8 gaattcaccattttcattatccttgctagatgagtattaggatcttttgcagaggctact 67
|||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 gaattcaccactgccattatccttgctagatgagtattaggatcttttgcagaggctact 547
Query: 68 gaactgactccctccatccaactcttttagtcacctcacacagcacatattctggctaag 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 gaactgactccctccatccaactcttttagtcacctcacacagcacatattctggctaag 487
Query: 128 ttctataccaagcctgagaactaatactatcttatggatgtgagctcagatgtggcccat 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 ttctataccaagcctgagaactaatactatcttatggatgtgagctcagatgtggcccat 427
Query: 188 gcctgggagctgagcagagaaacatcaagtcagcttggtggcaactttattactcctttt 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 gcctgggagctgagcagagaaacatcaagtcagcttggtggcaactttattactcctttt 367
Query: 248 gggacaatgcttcaatctcatcttgctctttttttggctatgtgagccacatgtcttagt 307
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 366 gggacaatgcttcaatctcatcttgctcaacttttggctatgtgagccacatgtcttagt 307
Query: 308 ttttctccagcttgtcaaaccctcttgtgagcctatatatagagagattctgtgctttgc 367
|||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 ttttctccagtttgttaaaccctcttgtgagcctatatatagagagattctgtgctttgc 247
Query: 368 accccttctcggggttataaccctgaagtctaccgtgtt 406
| | ||||||||||||||||||||||||||||||||||
Sbjct: 246 aatctttctcggggttataaccctgaagtctaccgtgtt 208
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 806
Length adjustment: 9
Effective length of query: 397
Effective length of database: 797
Effective search space: 316409
Effective search space used: 316409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no127_i17.g1 MSMg01no127_i17.g1 CHROMAT_FILE:
MSMg01no127_i17.g1 PHD_FILE: MSMg01no127_i17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:40:19 2005
(212 letters)
>mm_chr12_6274528_6275139
Length = 612
Score = 402 bits (208), Expect = e-117
Identities = 211/212 (99%)
Strand = Plus / Plus
Query: 1 cccagtagttttatagtgtttgcaaggtaaaacacaatgcactttggcattccacaagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cccagtagttttatagtgtttgcaaggtaaaacacaatgcactttggcattccacaagat 260
Query: 61 cactacatgaactctgtttctgctgaaagcccatccagtgctattcttttctctccccac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cactacatgaactctgtttctgctgaaagcccatccagtgctattcttttctctccccac 320
Query: 121 ctcttccctctttcatccatcagggagtcatttgttcaatattgaaaagatctcttttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcttccctctttcatccatcagggagtcatttgttcaatattgaaaagatctcttttcc 380
Query: 181 attttgtgtgtgtgtgtgtatgtgtgtgtgtg 212
||||||||||||||||||| ||||||||||||
Sbjct: 381 attttgtgtgtgtgtgtgtgtgtgtgtgtgtg 412
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 212
Length of database: 612
Length adjustment: 9
Effective length of query: 203
Effective length of database: 603
Effective search space: 122409
Effective search space used: 122409
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
