Query= MSMg01no127_l13.b1 MSMg01no127_l13.b1 CHROMAT_FILE:
MSMg01no127_l13.b1 PHD_FILE: MSMg01no127_l13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:40:34 2005
(364 letters)
>mm_chr12_6349523_6350286
Length = 764
Score = 642 bits (332), Expect = 0.0
Identities = 353/360 (98%), Gaps = 2/360 (0%)
Strand = Plus / Minus
Query: 4 gaattcaccactgctc-tcatccttgctagatgagtattaggatcttttgcagaggctac 62
|||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gaattcaccactgc-cattatccttgctagatgagtattaggatcttttgcagaggctac 504
Query: 63 tgaactgactccctccatccaactcttttagtcacctcacacagcacatattctggctaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tgaactgactccctccatccaactcttttagtcacctcacacagcacatattctggctaa 444
Query: 123 gttctataccaagcctgagaactaatactatcttatggatgtgagctcagatgtggccca 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gttctataccaagcctgagaactaatactatcttatggatgtgagctcagatgtggccca 384
Query: 183 tgcctgggagctgagcagagaaacatcatgtcagcttggtgtcaactttattactccttt 242
|||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 383 tgcctgggagctgagcagagaaacatcaagtcagcttggtggcaactttattactccttt 324
Query: 243 tgggacaatgcttcaatctcatcttgctcaacttttggctatgtgagccacatgtcctag 302
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 323 tgggacaatgcttcaatctcatcttgctcaacttttggctatgtgagccacatgtcttag 264
Query: 303 tttttctccagtttgttaaaccctcttgtgatcctatatatagagagattctgtgctttg 362
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 263 tttttctccagtttgttaaaccctcttgtgagcctatatatagagagattctgtgctttg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 364
Length of database: 764
Length adjustment: 9
Effective length of query: 355
Effective length of database: 755
Effective search space: 268025
Effective search space used: 268025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no127_l13.g1 MSMg01no127_l13.g1 CHROMAT_FILE:
MSMg01no127_l13.g1 PHD_FILE: MSMg01no127_l13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:40:34 2005
(194 letters)
>mm_chr12_6274528_6275122
Length = 595
Score = 362 bits (187), Expect = e-104
Identities = 193/195 (98%), Gaps = 1/195 (0%)
Strand = Plus / Plus
Query: 1 cccagtagttttatagtgtttgcaaggtaaaacacaatgcactttggca-tccccaagat 59
||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 201 cccagtagttttatagtgtttgcaaggtaaaacacaatgcactttggcattccacaagat 260
Query: 60 cactacatgaactctgtttctgctgaaagcccatccagtgctattcttttctctccccac 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cactacatgaactctgtttctgctgaaagcccatccagtgctattcttttctctccccac 320
Query: 120 ctcttccctctttcatccatcagggagtcatttgttcaatattgaaaagatctcttttcc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcttccctctttcatccatcagggagtcatttgttcaatattgaaaagatctcttttcc 380
Query: 180 attttgtgtgtgtgt 194
|||||||||||||||
Sbjct: 381 attttgtgtgtgtgt 395
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 595
Length adjustment: 8
Effective length of query: 186
Effective length of database: 587
Effective search space: 109182
Effective search space used: 109182
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
