Query= MSMg01no132_j16.b1 MSMg01no132_j16.b1 CHROMAT_FILE:
MSMg01no132_j16.b1 PHD_FILE: MSMg01no132_j16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:09 2005
(314 letters)
>mm_chr12_9992167_9992879
Length = 713
Score = 576 bits (298), Expect = e-169
Identities = 307/310 (99%), Gaps = 1/310 (0%)
Strand = Plus / Plus
Query: 5 gaattcctcataggtttgaatgccataggtttttataagccccatgttctaggggataat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctcataggtttgaatgccataggtttttataagccccatgttctaggggataat 264
Query: 65 taagatcattctcccatttttatctaaatcctttcagtgtcttggaaaaagatgtcccta 124
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taagatcattctcaaatttttatctaaatcctttcagtgtcttggaaaaagatgtcccta 324
Query: 125 tctttgtagaaactatgaacattatttgtatgcacattctatcaactttaaactgcttta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tctttgtagaaactatgaacattatttgtatgcacattctatcaactttaaactgcttta 384
Query: 185 taattatttacttacaagcttttttctccaagtagaaatatttgtcaataattaataccg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 taattatttacttacaagcttttttctccaagtagaaatatttgtcaataattaataccg 444
Query: 245 aatatgtttttttgtcgtcggtgttggtgtttttatgctggaccactggtctagtgcctg 304
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aatatgtttttt-gtcgtcggtgttggtgtttttatgctggaccactggtctagtgcctg 503
Query: 305 agagttggaa 314
||||||||||
Sbjct: 504 agagttggaa 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 713
Length adjustment: 9
Effective length of query: 305
Effective length of database: 704
Effective search space: 214720
Effective search space used: 214720
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no132_j16.g1 MSMg01no132_j16.g1 CHROMAT_FILE:
MSMg01no132_j16.g1 PHD_FILE: MSMg01no132_j16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:10 2005
(584 letters)
>mm_chr12_10104341_10105324
Length = 984
Score = 634 bits (328), Expect = 0.0
Identities = 328/328 (100%)
Strand = Plus / Minus
Query: 1 ctactgctgaaagcactacatacttctgatagaagacttagaagatttaagctgaatcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ctactgctgaaagcactacatacttctgatagaagacttagaagatttaagctgaatcta 269
Query: 61 acatgaatcccttcctgcctagtagtaccctaaggtgtttatgctcatatattctggtac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 acatgaatcccttcctgcctagtagtaccctaaggtgtttatgctcatatattctggtac 209
Query: 121 catgattgtagtgccagtaggttccatgcaagttgacaaagaaggggagtaaccattagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 catgattgtagtgccagtaggttccatgcaagttgacaaagaaggggagtaaccattagt 149
Query: 181 actacgcagttataatgcttatgaaccatgacaatgaatgaccagtacagtaagatatcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 actacgcagttataatgcttatgaaccatgacaatgaatgaccagtacagtaagatatcc 89
Query: 241 ataaaggtgtaatggcgggtcccatgttggtaatctaacattaaacagtaagccctagct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 ataaaggtgtaatggcgggtcccatgttggtaatctaacattaaacagtaagccctagct 29
Query: 301 gggcagtggtggcacatgccttgattcc 328
||||||||||||||||||||||||||||
Sbjct: 28 gggcagtggtggcacatgccttgattcc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 984
Length adjustment: 10
Effective length of query: 574
Effective length of database: 974
Effective search space: 559076
Effective search space used: 559076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
