Query= MSMg01no135_a07.b1 MSMg01no135_a07.b1 CHROMAT_FILE:
MSMg01no135_a07.b1 PHD_FILE: MSMg01no135_a07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:01 2005
(391 letters)
>mm_chr12_78828137_78828927
Length = 791
Score = 638 bits (330), Expect = 0.0
Identities = 367/386 (95%), Gaps = 11/386 (2%)
Strand = Plus / Plus
Query: 5 gaattcattcacatccctacccctcccctagtagtgcctgttaccaagtagatgctcagt 64
|||||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 216 gaattcattcacat-----------ccctagtagtgcccgttaccaagtagatgctcagt 264
Query: 65 agtagttaattaagtaaccttgaatttttaaaatccctctcacttcatgaaattggataa 124
|||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agtaattaattaagtaaacttgaatttttaaaatccctctcacttcatgaaattggataa 324
Query: 125 aagtgaacaaacagataaatcaatggattcattaaaaaaaacctgtatgatctttttcct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aagtgaacaaacagataaatcaatggattcattaaaaaaaacctgtatgatctttttcct 384
Query: 185 gcaattattaaatatgaccacctagtgccaggagatgctgaattgattgtgtatgctgta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gcaattattaaatatgaccacctagtgccaggagatgctgaattgattgtgtatgctgta 444
Query: 245 ttaggcacaagcgccttccctgagagtcaaattatgtcttttgggctagagattaaccat 304
||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 445 ttaggtacaagcaccttccctgagattcaaattatgtcttttgggctagagattaaccat 504
Query: 305 attggggcagtatttgaacaacatgtacgaggggaccttgggatgaaccccagaactgga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 505 attggggcagtatttgaacaacatgtacgaggggaccttgggatgaaccccagaactaga 564
Query: 365 gggggtggtggtggaagtagtttgcc 390
||||||||||||||||||| ||||||
Sbjct: 565 gggggtggtggtggaagtaatttgcc 590
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 391
Length of database: 791
Length adjustment: 9
Effective length of query: 382
Effective length of database: 782
Effective search space: 298724
Effective search space used: 298724
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no135_a07.g1 MSMg01no135_a07.g1 CHROMAT_FILE:
MSMg01no135_a07.g1 PHD_FILE: MSMg01no135_a07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:01 2005
(637 letters)
>mm_chr12_78966686_78967721
Length = 1036
Score = 1152 bits (596), Expect = 0.0
Identities = 621/630 (98%), Gaps = 3/630 (0%)
Strand = Plus / Minus
Query: 1 agacctattaacttcagggacaccctaggtaaggcctttcctcttcaatgatctggtttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 agacctattaacttcagggacaccctaggtaaggcctttcctcttcaatgatctggtttc 569
Query: 61 aggggaagtgaaaacctgcaaatgtctccttaatgtctcttgatggtacttaattgctgc 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 568 aggggaagtgaaaacctgcaaatgtctccttaatgtctcttgatggtactcaattgctgc 509
Query: 121 ctactttgtgtctaactgaaactctgcaaaaggcacagagtaaccccaggctctggagta 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 508 ctactttgtgtctaactgaaactctgcaaaaggcacagagtaaccccaggctctggggta 449
Query: 181 cgatttca-tttggattctttctctttcaggccctcctatctgtcacctggagttgagag 239
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 cgatttcattttggattctttctctttcaggccctcctatctgtcacctggagttgagag 389
Query: 240 cagtcctcctttctttcttctggttttctctgttactggtgctaagagtcttgacatttt 299
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 388 cagtcctcctttctttcttctggttt--tctgttactggtgctaagagtcttgacatttt 331
Query: 300 agacttcatcagaaaatcttggttcctgagtttctagagtttctaaaatagatgtgtagg 359
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 agacctcatcagaaaatcttggttcctgagtttctagagtttctaaaatagatgtgtagg 271
Query: 360 attgactcatttctaagacccctacttgccacagggggctgctactgtacttgatatact 419
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 270 actgactcatttctaagacccctacttgccacagggggctgctactgtacttgatacact 211
Query: 420 tcatttgctttgtataaatgtatatgatgtatatatgtccatgtatatatgtgtatacat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 tcatttgctttgtataaatgtatatgatgtatatatgtccatgtatatatgtgtatacat 151
Query: 480 ttagtggcctttgtggaagatgggggaagacagggtagaagtctccttccttcactcagc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 ttagtggcctttgtggaagatgggggaagacagggtagaagtctccttccttcactcagc 91
Query: 540 acttcaaactcagggtacccaggacttccttacacaacatatcacctgaacacagagagc 599
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 acttcaaactcggggtacccaggacttccttacacaacatatcacctgaacacagagagc 31
Query: 600 acctcacagaatggttgggttctcatttca 629
||||||||||||||||||||||||||||||
Sbjct: 30 acctcacagaatggttgggttctcatttca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1036
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1026
Effective search space: 643302
Effective search space used: 643302
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|