CTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAAAAGAGGATCCGCG
GAATTCAGCAATGCCCTTCAACTGACTCCTTAGTCACTCCCCACCTCTGG
CTCAATCTGAAGTTCCTGTATGAGGGTTTGCCACCTCCACTTACTTAAAC
CTTGAAGTTTATCCTTCCCACTGTTCTCCCACCCTATCTGTGAGGCACCT
GATAGTCAGGGTCTGGCTGCTTGTTCTGCTATTGGCATGAAGTTATGAAA
ACTGCTCTGCTAAAGAAAAGGGTGAGGAGAGCCCATTAGTTTTCCAACTA
TTTCCAAGAAAAGGCCTATTTAATACAATTCTTGGAAGCCTGAGCCATCA
CTTCCCTGCTGAGGAATAATAATATTCTTCATCCCGAAAGACAAAGAGAC
AGACAGACACAGAACAACCTAACAGGTCTAGAAAGCTGATACAAATATCC
CCTCAACCCTTCAACACTGAAGGCGTTAGTGTGAAACACTGTGTGCAGTC
TTGGAGAAAAATCTTGGTAACAACATCTTAAACAACAAGGCATTTAATTA
TCAATGCTACAAGACAGGAGCTGCCTGCTCCCAATCTCTGCTGCTGCATT
TCTAGGCTTCGTCTCANATCTCCATCTCAATTTAAAGGGTTTAATATTTT
CACTTGCATGCACATATTTATGATCGGAGGAGAAGGGTGGAAGAATAAAG
AGAGAATTTTN

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCACGTTAGCTACTCTTTTTCATTAA
AGCTCATTACTAAATTGACTCAATGACTTATTAATGGCTCCCAACCCATA
GTTTGAAAAATACTACCGCAATGCCACATATAAGAGACAGACTGCATTAG
AACTCAGACTTTGTTAGGTTTCTGTCAAGTTCTTAACATGGTGTTGGCAT
GGAGTTTTTCTCTTTCTCTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTT
TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTTCCT
TCCGTCCTTCCTCCTTTTCTTGTGTGTGTGTGTATGTGTGTGTGTGTGCA
TGTATGTGTTCCCACCTATGTGGGTACACTTAATATGTCTCCAATGGAAA
CCTAAGATTGATGCCAGGATTATTCCCTTTCTCTGATATCAATTCCTCTC
AAATCCTCCTATATAATTCTTCTTGAATTAATGCCCTGTCTCCTGTGTGT
TGCGCGTGCGCCTCTATACCCCGCCTCATTCTTTTATCTCCCTCTTTTCT
CTGCCCCTCCCCCCTCTTTCTGGTGCGTTCCGTGCTTTTTCCCCCTTACT
TTATTGGAGTCCGCCCCCCACTCCCCCCCCTCACCCCTTCTCCCTTCTTT
TTCTCTCTCCTCTCCCCTCC

Query= MSMg01no135_e11.b1 MSMg01no135_e11.b1 CHROMAT_FILE:
MSMg01no135_e11.b1 PHD_FILE: MSMg01no135_e11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:22 2005
         (634 letters)



>mm_chr12_41320140_41321173
          Length = 1034

 Score = 1176 bits (608), Expect = 0.0
 Identities = 622/627 (99%)
 Strand = Plus / Minus

                                                                       
Query: 8   ggaattcagcaatgcccttcaactgactccttagtcactccccacctctggctcaatctg 67
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 834 ggaattcagcaatgcccttcaactgactccttagtcactccccaccgctggctcaatctg 775

                                                                       
Query: 68  aagttcctgtatgagggtttgccacctccacttacttaaaccttgaagtttatccttccc 127
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 aagttcctgtatgagggtttgccacctccacttacttaaaccttgaagtttatccttccc 715

                                                                       
Query: 128 actgttctcccaccctatctgtgaggcacctgatagtcagggtctggctgcttgttctgc 187
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 actgttctcccaccctatctgtgaggcacctgatagtcagggtctggctgcttgttctgc 655

                                                                       
Query: 188 tattggcatgaagttatgaaaactgctctgctaaagaaaagggtgaggagagcccattag 247
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 654 tattggcatgaagttatgaaaactgctctgctaaagaaaagggtggggagagcccattag 595

                                                                       
Query: 248 ttttccaactatttccaagaaaaggcctatttaatacaattcttggaagcctgagccatc 307
           |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||
Sbjct: 594 ttttccaactatttccaagaaaaggcctaagtaatacaattcttggaagcctgagccatc 535

                                                                       
Query: 308 acttccctgctgaggaataataatattcttcatcccgaaagacaaagagacagacagaca 367
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 acttccctgctgaggaataataatattcttcatcccgaaagacaaagagacagacagaca 475

                                                                       
Query: 368 cagaacaacctaacaggtctagaaagctgatacaaatatcccctcaacccttcaacactg 427
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 cagaacaacctaacaggtctagaaagctgatacaaatatcccctcaacccttcaacactg 415

                                                                       
Query: 428 aaggcgttagtgtgaaacactgtgtgcagtcttggagaaaaatcttggtaacaacatctt 487
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 aaggcgttagtgtgaaacactgtgtgcagtcttggagaaaaatcttggtaacaacatctt 355

                                                                       
Query: 488 aaacaacaaggcatttaattatcaatgctacaagacaggagctgcctgctcccaatctct 547
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 aaacaacaaggcatttaattatcaatgctacaagacaggagctgcctgctcccaatctct 295

                                                                       
Query: 548 gctgctgcatttctaggcttcgtctcanatctccatctcaatttaaagggtttaatattt 607
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 294 gctgctgcatttctaggcttcgtctcaaatctccatctcaatttaaagggtttaatattt 235

                                      
Query: 608 tcacttgcatgcacatatttatgatcg 634
           |||||||||||||||||||||||||||
Sbjct: 234 tcacttgcatgcacatatttatgatcg 208


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space:   638976
Effective search space used:   638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)