Query= MSMg01no135_g13.b1 MSMg01no135_g13.b1 CHROMAT_FILE:
MSMg01no135_g13.b1 PHD_FILE: MSMg01no135_g13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:32 2005
(662 letters)
>mm_chr12_41420516_41421577
Length = 1062
Score = 1168 bits (604), Expect = 0.0
Identities = 646/660 (97%), Gaps = 4/660 (0%)
Strand = Plus / Plus
Query: 5 gaattcctcatcttcgtccctgggctgtatcactaaggaatggaaaaatatgaaatggga 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctcatcttggtccctgggctgtatcactaaggaatggaaaaatatgaaatggga 264
Query: 65 cttctctggctgaaaaactgtctgggtggctctgtgcttatgtagcttttgtctggcttt 124
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cttctctggctgaagaactgtctgggtggctctgtgcttatgtagcttttgtctggcttt 324
Query: 125 aatgatgggaggagctgggaatgaggct-gtttctgcctcttgctggcagagctttgtaa 183
|||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||
Sbjct: 325 aatgatgggaggagctgggaatgaggcttgcttctgcctcttgctggcagagctctgtaa 384
Query: 184 tgtatggttcatactctc-agagcaaacattccttccagacagacacatctctgcttgcc 242
|||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgtatggttcatactctcca-agcaaacattccttccagacagacacatctctgcttgcc 443
Query: 243 atgagcctgcaagaaagcttttgaaaacccatctcatcatttcctcttttttttttcttt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 444 atgagcctgcaagaaagcttttgaaaacccatctcatcatttcctcttttttttt-cttt 502
Query: 303 tcttccttgacctcttactattacaaccaagatggagataagaacaatgcacgtaggttc 362
||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||
Sbjct: 503 tcttccttgacctcttactattacaaccaagctggaaataagagcaatgcacgtaggttc 562
Query: 363 ctaaccatcagagtacagctgtcagactcactggaatttatacagtgacaaacagtcact 422
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ctaaacatcagagtacagctgtcagactcactggaatttatacagtgacaaacagtcact 622
Query: 423 gctctactgtcctttgttgctttcaaactaaccagtggcttagtggcttagtgaaaactt 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gctctactgtcctttgttgctttcaaactaaccagtggcttagtggcttagtgaaaactt 682
Query: 483 gagttgaatgttccagtgaggaaatatttatgaataacatttctggtcacagtgcctgtg 542
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gagttgaatgttccagagaggaaatatttatgaataacatttctggtcacagtgcctgtg 742
Query: 543 gactgtctgcaggcatggcccctcctatctcatttcctagactgtccttcagactttatt 602
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 gaccgtctgcaggcatggcccctcctatctcatttcctagactgtccttcagactttatt 802
Query: 603 tgcattgagtattctgatggggccagaataggtgaggcccacctcacaccaagaggatca 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 tgcattgagtattctgatggggccagaataggtgaggcccacctcacaccaagaggatca 862
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1062
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1052
Effective search space: 685904
Effective search space used: 685904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no135_g13.g1 MSMg01no135_g13.g1 CHROMAT_FILE:
MSMg01no135_g13.g1 PHD_FILE: MSMg01no135_g13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:32 2005
(236 letters)
>mm_chr12_41570842_41571477
Length = 636
Score = 455 bits (235), Expect = e-132
Identities = 235/235 (100%)
Strand = Plus / Minus
Query: 1 atcgcaggtacatagaaaagtgacttatagctgagacaccttacggggcaggggcctggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 atcgcaggtacatagaaaagtgacttatagctgagacaccttacggggcaggggcctggg 376
Query: 61 cctagggccaggctcagtcctacgggtcccattctccaggtggctggaccgcgcagccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 cctagggccaggctcagtcctacgggtcccattctccaggtggctggaccgcgcagccaa 316
Query: 121 gggcttggggggcagagcaggtggctcagaggtgacagggatggagaggctgtgaggtag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gggcttggggggcagagcaggtggctcagaggtgacagggatggagaggctgtgaggtag 256
Query: 181 cgggacagggcgccgcagagtccgctcgtagacactgtaggggggtggggttttg 235
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 cgggacagggcgccgcagagtccgctcgtagacactgtaggggggtggggttttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space: 142329
Effective search space used: 142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
