MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-136I12
Chromosome	12 (Build37)
Map Location	81,041,308 - 81,041,782
singlet/doublet	singlet
Overlap gene	none
Upstream gene	6330442E10Rik, Plekhh1, Pigh, LOC666722, Arg2, Vti1b, Rdh11, Rdh12, Zfyve26, Rad51l1, LOC100041968, LOC435309
Downstream gene	LOC100041674, LOC666754, Zfp36l1, Actn1, Wdr22, Exdl2, 2310002D06Rik, Galntl1, LOC100041715, Erh, Slc39a9, 3830431G21Rik, Gm1568, 4933426M11Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	6330442E10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:268567 MGI:2444389
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Plekhh1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:211945 MGI:2144989
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 155 ESTs, 2 Proteins

name	Pigh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110417 MGI:99463
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666722 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666722
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Arg2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11847 MGI:1330806
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Vti1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53612 MGI:1855688
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rdh11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17252 MGI:102581
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rdh12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77974 MGI:1925224
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfyve26 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:211978 MGI:1924767
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rad51l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19363 MGI:1099436
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041968 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041968
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs

name	LOC435309 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:435309
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100041674 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041674
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC666754 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666754
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Zfp36l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12192 MGI:107946
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Actn1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109711 MGI:2137706
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wdr22 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320808 MGI:2444785
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Exdl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:97827 MGI:1922485
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310002D06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69522 MGI:1916772
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Galntl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108760 MGI:1917754
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041715 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041715
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Erh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13877 MGI:108089
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc39a9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:328133 MGI:1914820
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 47 ESTs, 2 Proteins

name	3830431G21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217682 MGI:3036228
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 24 ESTs, 2 Proteins

name	Gm1568 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:380768 MGI:2686414
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4933426M11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217684 MGI:2444661
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	6330442E10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46048373 GeneID:268567 MGI:2444389
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 6330442E10 gene transcript_id : NM_178745.3

name	Plekhh1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263319 GeneID:211945 MGI:2144989
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 155 ESTs, 2 Proteins product : pleckstrin homology domain containing, family H (with MyTH4 domain) member 1, transcript variant 1 transcript_id : XM_126961.8

name	Pigh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76253935 GeneID:110417 MGI:99463
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatidylinositol glycan anchor biosynthesis, class H transcript_id : NM_029988.2

name	Arg2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6753109 GeneID:11847 MGI:1330806
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : arginase type II transcript_id : NM_009705.1

name	Vti1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31980616 GeneID:53612 MGI:1855688
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vesicle transport through interaction with t-SNAREs 1B homolog transcript_id : NM_016800.2

name	Rdh11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350792 GeneID:17252 MGI:102581
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : retinol dehydrogenase 11 transcript_id : NM_021557.3

name	Rdh12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142357436 GeneID:77974 MGI:1925224
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : retinol dehydrogenase 12 transcript_id : NM_030017.2

name	Zfyve26 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112818583 GeneID:211978 MGI:1924767
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, FYVE domain containing 26 transcript_id : NM_001008550.1

name	Rad51l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381729 GeneID:19363 MGI:1099436
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAD51-like 1 (S. cerevisiae) transcript_id : NM_009014.3

name	LOC100041968 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263335 GeneID:100041968
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs product : hypothetical protein LOC100041968 transcript_id : XM_001477600.1

name	LOC100041674 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263322 GeneID:100041674
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to Ubtf protein transcript_id : XM_001476819.1

name	Zfp36l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802021 GeneID:12192 MGI:107946
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 36, C3H type-like 1 transcript_id : NM_007564.3

name	Actn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61097905 GeneID:109711 MGI:2137706
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : actinin, alpha 1 transcript_id : NM_134156.1

name	Wdr22 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542047 GeneID:320808 MGI:2444785
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : WD repeat domain 22 transcript_id : NM_177267.3

name	Exdl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19527013 GeneID:97827 MGI:1922485
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : exonuclease 3''-5'' domain-like 2 transcript_id : NM_133798.1

name	2310002D06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94392983 GeneID:69522 MGI:1916772
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : RIKEN cDNA 2310002D06 gene transcript_id : XM_899399.2

name	Galntl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487252 GeneID:108760 MGI:1917754
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1 transcript_id : NM_001081421.1

name	Erh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892169 GeneID:13877 MGI:108089
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : enhancer of rudimentary homolog (Drosophila) transcript_id : NM_007951.2

name	Slc39a9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94392986 GeneID:328133 MGI:1914820
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 47 ESTs, 2 Proteins product : solute carrier family 39 (zinc transporter), member 9, transcript variant 2 transcript_id : XM_891220.2

name	3830431G21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263342 GeneID:217682 MGI:3036228
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 24 ESTs, 2 Proteins product : RIKEN cDNA 3830431G21 gene, transcript variant 1 transcript_id : XM_126991.8

name	Gm1568 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56606028 GeneID:380768 MGI:2686414
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 1568, (NCBI) transcript_id : NM_001008423.1

name	4933426M11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31581563 GeneID:217684 MGI:2444661
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4933426M11 gene transcript_id : NM_178682.3

name	6330442E10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30520191 CCDS:CCDS26005.1 GeneID:268567 MGI:2444389
definition	codon_start : 1 product : hypothetical protein LOC268567 protein_id : NP_848860.1

name	Plekhh1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263320 GeneID:211945 MGI:2144989
definition	codon_start : 1 product : pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 isoform 1 protein_id : XP_126961.7

name	Pigh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41872422 CCDS:CCDS26006.1 GeneID:110417 MGI:99463
definition	codon_start : 1 note : phosphatidylinositol glycan, class H product : phosphatidylinositol glycan anchor biosynthesis, class H protein_id : NP_084264.1

name	Arg2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753110 CCDS:CCDS26007.1 GeneID:11847 MGI:1330806
definition	GO_component : GO:0005739 - mitochondrion [Evidence ISS] [Evidence IEA] GO_function : GO:0004053 - arginase activity [Evidence IEA] [Evidence ISS]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016813 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0006527 - arginine catabolism [Evidence IEA]; GO:0006525 - arginine metabolism [Evidence IEA]; GO:0006941 - striated muscle contraction [Evidence IMP]; GO:0000050 - urea cycle [Evidence IEA] codon_start : 1 function : conversion of arginine to ornithine and urea product : arginase type II protein_id : NP_033835.1

name	Vti1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980617 CCDS:CCDS26008.1 GeneID:53612 MGI:1855688
definition	GO_component : GO:0005794 - Golgi apparatus [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : Soluble N-ethylmaleimide-sensitive factor-attachment protein receptor; A novel SNARE product : vesicle transport through interaction with t-SNAREs 1B homolog protein_id : NP_058080.2

name	Rdh11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19482172 GeneID:17252 MGI:102581
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0005622 - intracellular [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004745 - retinol dehydrogenase activity [Evidence ISS] GO_process : GO:0045494 - photoreceptor maintenance [Evidence ISS]; GO:0042572 - retinol metabolism [Evidence ISS] codon_start : 1 note : short-chain aldehyde dehydrogenase; cell line MC/9.IL4 derived transcript 1; all-trans and 9-cis; androgen-regulated short-chain dehydrogenase/reductase 1; ubiquitously expressing product : short-chain dehydrogenase/reductase 1 protein_id : NP_067532.2

name	Rdh12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037513 CCDS:CCDS26009.1 GeneID:77974 MGI:1925224
definition	GO_component : GO:0005622 - intracellular [Evidence ISS] GO_function : GO:0004745 - retinol dehydrogenase activity [Evidence ISS] GO_process : GO:0045494 - photoreceptor maintenance [Evidence ISS]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0042572 - retinol metabolism [Evidence ISS]; GO:0007601 - visual perception [Evidence IEA] codon_start : 1 product : retinol dehydrogenase 12 protein_id : NP_084293.1

name	Zfyve26 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:112818584 GeneID:211978 MGI:1924767
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : zinc finger, FYVE domain containing 26 protein_id : NP_001008550.1

name	Rad51l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982072 GeneID:19363 MGI:1099436
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0008094 - DNA-dependent ATPase activity [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA] GO_process : GO:0006259 - DNA metabolism [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006974 - response to DNA damage stimulus [Evidence IEA] codon_start : 1 product : RAD51-like 1 protein_id : NP_033040.2

name	LOC100041968 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263336 GeneID:100041968
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477650.1

name	LOC100041674 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263323 GeneID:100041674
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476869.1

name	Zfp36l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680808 CCDS:CCDS26010.1 GeneID:12192 MGI:107946
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005829 - cytosol [Evidence ISS]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003729 - mRNA binding [Evidence ISS]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006402 - mRNA catabolism [Evidence ISS]; GO:0043488 - regulation of mRNA stability [Evidence ISS] codon_start : 1 note : butyrate response factor 1 product : zinc finger protein 36, C3H type-like 1 protein_id : NP_031590.1

name	Actn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61097906 CCDS:CCDS26011.1 GeneID:109711 MGI:2137706
definition	GO_component : GO:0015629 - actin cytoskeleton [Evidence ISS]; GO:0030863 - cortical cytoskeleton [Evidence TAS]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0032127 - dense core granule membrane [Evidence TAS]; GO:0005925 - focal adhesion [Evidence TAS]; GO:0030141 - secretory granule [Evidence NAS]; GO:0001725 - stress fiber [Evidence TAS]; GO:0030018 - Z disc [Evidence IDA] GO_function : GO:0003779 - actin binding [Evidence ISS]; GO:0051015 - actin filament binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0042803 - protein homodimerization activity [Evidence TAS] GO_process : GO:0051017 - actin filament bundle formation [Evidence IDA]; GO:0008150 - biological_process [Evidence ND]; GO:0030865 - cortical cytoskeleton organization and biogenesis [Evidence TAS] codon_start : 1 note : alpha actinin 1a product : actinin, alpha 1 protein_id : NP_598917.1

name	Wdr22 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:56090231 CCDS:CCDS26013.1 GeneID:320808 MGI:2444785
definition	codon_start : 1 product : WD repeat domain 22 protein_id : NP_796241.3

name	Exdl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19527014 GeneID:97827 MGI:1922485
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0004527 - exonuclease activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004518 - nuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA] codon_start : 1 product : exonuclease 3''-5'' domain-like 2 protein_id : NP_598559.1

name	2310002D06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82942866 GeneID:69522 MGI:1916772
definition	codon_start : 1 product : hypothetical protein LOC69522 protein_id : XP_904492.1

name	Galntl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487253 GeneID:108760 MGI:1917754
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0004653 - polypeptide N-acetylgalactosaminyltransferase activity [Evidence IEA]; GO:0005529 - sugar binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1 protein_id : NP_001074890.1

name	Erh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679685 GeneID:13877 MGI:108089
definition	GO_function : GO:0003674 - molecular_function [Evidence IEA] [Evidence ND] GO_process : GO:0006139 - nucleobase, nucleoside, nucleotide and nucleic acid metabolism [Evidence ISS]; GO:0006213 - pyrimidine nucleoside metabolism [Evidence ISS]; GO:0000074 - regulation of progression through cell cycle [Evidence ISS] codon_start : 1 note : preimplantation protein 1 product : enhancer of rudimentary homolog protein_id : NP_031977.1

name	Slc39a9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94392987 GeneID:328133 MGI:1914820
definition	codon_start : 1 product : solute carrier family 39 (zinc transporter), member 9 isoform 2 protein_id : XP_896313.2

name	3830431G21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28521618 GeneID:217682 MGI:3036228
definition	codon_start : 1 product : similar to hCG21972, isoform 1 protein_id : XP_126991.2

name	Gm1568 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:56606029 CCDS:CCDS26015.1 GeneID:380768 MGI:2686414
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC380768 protein_id : NP_001008423.1

name	4933426M11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30520071 CCDS:CCDS26016.1 GeneID:217684 MGI:2444661
definition	codon_start : 1 product : hypothetical protein LOC217684 protein_id : NP_848797.1

name	LOC666722 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666722
definition	number : 1 pseudo : _no_value

name	LOC435309 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435309
definition	number : 1 pseudo : _no_value

name	LOC666754 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666754
definition	number : 1 pseudo : _no_value

name	LOC100041715 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041715
definition	number : 1 pseudo : _no_value

clone name	MSMg01-237K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332J13
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-136I12.T7 (MSMg01no136_i12.b1)	MSMg01-136I12.TJ (MSMg01no136_i12.g1)
ACC	AG342706	AG342707
length	689	695
length of high quality (start - end)	566 (53 - 618)	565 (82 - 646)
definition	CHROMAT_FILE: MSMg01no136_i12.b1 PHD_FILE: MSMg01no136_i12.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:52:57 2005	CHROMAT_FILE: MSMg01no136_i12.g1 PHD_FILE: MSMg01no136_i12.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:52:57 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	CGNNNTTATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXCGCGGAATTCTTTGGAGTCCCCCTTTATAATATAAAGATGACTAAAGG CTATCAGTTGGCTAACTCTCAAAAGACTAGTTAATGGGATCAAGCCTGAA TATCTTGATGACTGAGTTTAATTCTTTATTTGGATATTTATGCACAGAAC TCCCATTAGTCAACTCTACTGCCCACTCAAATGGTTATTATGGTCTATTT TCATCTCCATATAATCACAATGGTGGTCCACCAAACACTACCTTCCTCCT GTGCCTGCCCACTGTCTTCTCTTCTGTGTGTTAAACCCAATGACTGGTGC TTGTTCTTTATTCTTCTGTCCTCTATGCAATGGAACTTTGGTCATTAGCT TCTCTTCACCTGTCTAGTTCCGCCTGTCTATTTCTATGGTTTCCTAAAAC TTCATGGCTTTATTTCAGTTGTATCAGTACTGGGGATTGAATCCAGGGAC TTACATATTATGCAAATGCCTTACTACTGAGTATCTGCCCACTATATATA TATTGTGTGTGTGTATGTGTGCACGCGCACATGGATGTGAGTGTATGTAT TTGTGTGTATGTGCATTTACATGCATGTGGAGGCCAGAGGTCAACCTCTG GTGTCATTTCTCGGTAGCTATCCACTTTGTCTTGCTGAA	CTTTTNNCCGATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAA TGGCTGAGAAGCACCTGAAAAAATGTTCACCATCCTTAATCATTGGGGAT CAAAACAACCTTGAGATTCCACCTCACTCCAGTCAGAATGACTAAGATCA AAAATTCAGGTGACAGCAGTTGCTGGCGAGGATGTGGAGAAAGAGGAACA CTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATC AGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCTG CAATACCTCTCCTGGGCATATATCCAGAAGATGTTCCAACCGGTAAGAAG GACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAG CTGGAAAGAACCCAGATGCCCCTTAACAGAGGAACAGAAAATATGGTACA TTTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAA TTCCTAGGCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAAC TCAATCACAAAAGAACTCACACAATATGTACTCACTGATAAGTGAATATT AGCCCAGAAACTTAGAATACCCAAGATATAAGATACAATTTGCTA
quality values	Open. Hide. 3 3 0 0 0 3 7 8 10 13 13 16 23 23 16 11 11 19 15 15 10 10 14 23 23 29 26 24 24 24 39 39 22 18 11 11 13 19 19 9 9 9 9 9 9 6 6 6 6 8 12 13 20 24 28 28 33 33 36 50 50 33 50 47 37 25 15 8 8 8 8 9 8 15 28 34 47 47 41 22 12 10 11 26 23 50 50 36 35 35 37 37 37 53 57 53 53 53 50 50 50 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 51 50 47 47 50 34 21 10 13 10 21 21 50 48 50 57 57 57 48 48 41 50 41 50 57 68 68 68 68 51 51 51 51 51 51 51 51 51 51 51 51 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 51 50 48 48 48 48 48 46 50 50 51 68 51 51 51 51 50 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 59 57 57 68 68 68 57 57 50 50 50 43 43 47 47 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 57 57 57 54 48 47 47 47 54 57 59 59 59 59 59 59 59 59 59 57 57 50 53 44 44 43 43 43 59 59 59 59 59 47 44 44 44 41 39 44 44 44 47 47 59 47 59 41 22 12 8 8 8 19 15 32 37 59 59 59 59 57 57 57 57 57 57 54 59 59 68 68 59 59 54 54 54 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 54 54 59 59 54 54 59 57 43 43 43 57 57 59 57 57 43 43 43 57 57 68 68 68 59 59 50 50 43 43 37 43 43 57 48 57 39 43 43 57 57 57 57 46 43 43 43 43 46 57 44 48 48 57 57 68 68 68 59 57 57 46 37 37 41 46 48 54 57 57 57 57 57 59 59 59 48 48 48 59 59 59 59 68 57 57 57 48 40 40 28 25 25 28 33 37 39 43 48 48 59 48 39 39 32 32 30 37 37 46 46 41 41 41 32 23 22 25 30 27 36 37 37 37 28 26 14 14 23 28 39 48 47 43 43 46 37 36 28 25 25 28 36 39 37 37 28 19 15 10 10 10 10 22 23 32 23 15 14 19 19 14 14 16 24 21 21 18 13 13 18 19 18 18 12 10 10 12 18 20 28 28 19 15 26 24 18 14 15 18 14 16 22 23 22 10 9 10 9 9 10 22 21 22 16 16 16 17 19 24 20 17 22 21 25 14 14 14 21 21 15 14	Open. Hide. 6 6 6 7 3 0 0 3 8 8 10 11 12 11 10 9 15 3 0 3 9 19 30 33 31 31 39 41 41 44 50 50 50 47 47 41 23 18 9 9 9 6 6 6 6 6 10 15 15 24 19 23 34 34 33 36 36 50 50 50 53 53 41 41 32 26 19 15 20 16 21 12 16 16 23 17 25 28 31 28 31 44 47 53 50 50 57 57 57 57 42 37 40 40 40 42 57 57 57 57 57 54 54 54 57 57 57 57 57 57 57 57 57 50 53 57 68 68 68 68 50 50 50 50 50 50 50 50 50 50 50 51 51 51 68 68 68 51 50 50 50 50 50 50 68 68 50 50 50 50 50 50 57 68 68 68 68 68 68 68 68 68 68 50 50 50 50 50 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 48 46 46 46 41 47 43 43 57 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 59 59 59 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 68 68 68 68 68 68 68 62 62 62 59 57 57 68 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 59 59 57 57 57 57 44 38 32 20 20 27 23 23 32 32 43 52 59 59 59 59 59 57 57 57 57 57 68 68 68 68 59 59 59 59 59 59 59 59 68 68 68 68 68 59 59 59 59 59 59 59 57 59 59 59 57 57 47 47 43 44 43 43 43 57 57 57 57 57 48 48 48 48 48 68 68 68 57 59 57 57 54 54 54 57 57 68 68 57 57 57 57 53 53 57 57 57 57 59 59 59 57 48 43 43 40 37 28 24 14 14 14 33 33 39 39 39 39 30 30 30 30 33 33 40 39 43 43 46 46 46 46 43 43 46 47 48 48 48 48 48 48 57 57 57 48 48 43 43 43 43 48 48 57 57 59 59 54 54 59 59 54 54 54 57 57 57 57 48 48 48 48 48 48 59 57 43 39 39 39 39 47 48 48 48 59 59 40 40 39 37 37 43 37 37 41 41 43 43 46 46 47 48 46 43 43 43 43 47 48 43 41 40 40 41 41 41 38 36 37 39 39 39 39 42 40 39 47 41 41 37 37 43 43 41 41 47 59 47 39 33 30 30 39 39 47 48 48 47 47 43 43 42 42 43 42 48 48 48 50 50 57 48 48 57 48 48 48 57 57 47 47 47 47 47 43 47 43 39 36 37 37 37 26 16 10 10 16 19 30 39 40 34 39 33 32 26 29 27 23 23 22 19 19 20 20 20 31 32 43 43 43 40 39 39 35 35 39 39 43 43 43 29 26 15 15 12 22 16 20 20 19 19 13 16 16 18 23 30 28 19 19 21 22 19 21 11 11 14 12 12 18 18 15 18 23 23 28 32 37 39 31 30 14 14 12 16 18 14 23 23 32 32 28 13 10 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no136_i12.b1 MSMg01no136_i12.b1 CHROMAT_FILE:
MSMg01no136_i12.b1 PHD_FILE: MSMg01no136_i12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:57 2005
         (566 letters)



>mm_chr12_81041087_81042051
          Length = 965

 Score =  810 bits (419), Expect = 0.0
 Identities = 464/479 (96%), Gaps = 7/479 (1%)
 Strand = Plus / Plus

                                                                       
Query: 22  cctttat-aatataaagatgactaaaggctatcagttggctaactctcaaaagactagtt 80
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 222 cctttataaatataaagatgactaaaggctatcagttggctaactctcaaaagac-a-tt 279

                                                                       
Query: 81  aatgggatcaagcctgaatatcttgatgactgagtttaattctttatttggatatttatg 140
           |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 280 aatggggtcaagcctgaatatcttgaagactgagtttaattctttatttggatatttatg 339

                                                                       
Query: 141 cacagaactcccattagtcaactctactgccc-actcaaatggttattatggtctatttt 199
           |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 340 cacagaactcccattagtcaactctactgcccga-tcaaatggttattatggtctatttt 398

                                                                       
Query: 200 catctccatataatcacaatggtggtccaccaaacactaccttcctcctgtgcctgccca 259
           |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 399 catctccatataatcacaatggtggtccaccaaacactgccttcctcctgtacctgccca 458

                                                                       
Query: 260 ctgtcttctcttctgtgtgttaaacccaatgactggtgcttgttctttattcttctgtcc 319
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 ctgtcttctctcctgtgtgttaaacccaatgactggtgcttgttctttattcttctgtcc 518

                                                                       
Query: 320 tctatgcaatggaactttggtcattagcttctcttcacctgtctagttccgcctgtctat 379
           ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| 
Sbjct: 519 tctatgcaatggaactttggtcattagcttctcttcacctgtctagttccatctgtctag 578

                                                                       
Query: 380 ttctatggtttcctaaaacttca-tggctttatttcagttgtatcagtactggggattga 438
           ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 579 ttctatggtttcctaaaactt-agtggctttatttcagttgtatcagtactggggattga 637

                                                                      
Query: 439 atccagggacttacatattatgcaaatgccttactactgagtatctgcccactatatat 497
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 atccagggacttacatattatgcaaatgccttactactgagtatctgcccactatatat 696


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 965
Length adjustment: 10
Effective length of query: 556
Effective length of database: 955
Effective search space:   530980
Effective search space used:   530980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information