Query= MSMg01no138_a04.b1 MSMg01no138_a04.b1 CHROMAT_FILE:
MSMg01no138_a04.b1 PHD_FILE: MSMg01no138_a04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:54 2005
(664 letters)
>mm_chr12_61072477_61073540
Length = 1064
Score = 1205 bits (623), Expect = 0.0
Identities = 650/659 (98%)
Strand = Plus / Minus
Query: 5 gaattctttcaccagacatcttttcaactgtccacatgcatttaaaggccacaaacatca 64
|||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 gaatcctttcaccagagatcttttcaactgtccacatgcatttaaaggccacaaacatca 718
Query: 65 acccaaagaatggctgctccagggcttctagaattttgaaatttctcatcttttcactat 124
||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 717 acctaaagaatggctgatccagggcttctagaattttgaaatttctcatgttttcattat 658
Query: 125 aaatttgtcaaattaacatttggggcttttggatgcaagttaggcctcattctgcatctg 184
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 657 aaatttgtcaaattaacatttggggcttttggatgcaagttgggcctcattctgcatctg 598
Query: 185 cctgcagttagaagataccacagggtagcctcatgaaaagtccttttgtggcccgttttc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 cctgcagttagaagataccacagggtagcctcatgaaaagtccttttgtggcccgttttc 538
Query: 245 tttttgttctaactcttgttgtaccacttgctcccaatagtcttggtttcatagtctgtt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 tttttgttctaactcttgttgtaccacttgctcccaatagtcttggtttcatagtctgtt 478
Query: 305 ttcctctgacttatgctcatatctcattaaggagcagctgggagtctgtgctaacaaaat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 ttcctctgacttatgctcatatctcattaaggagcagctgggagtctgtgctaacaaaat 418
Query: 365 agaccattacaacagcagaacaaagttacagtctctcagatgcctacttctgactccaca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 agaccattacaacagcagaacaaagttacagtctctcagatgcctacttctgactccaca 358
Query: 425 aaacggcaaattaatgctgctcacattcagacctcagatactgtttagcacagattgcat 484
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 357 aaacggcaaattaatgctgctcacattcagacctcagataccgtttagcacagattgcat 298
Query: 485 aacacttgaaatttggttgttgtctttaatgatatgtattactgatgtcaaaataaaaac 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 aacacttgaaatttggttgttgtctttaatgatatgtattactgatgtcaaaataaaaac 238
Query: 545 ttccagtcaagctagccgactgtttggtgggttttttgttttgttttgttttgttttcac 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 ttccagtcaagctagccgactgtttggtgggttttttgttttgttttgttttgttttcac 178
Query: 605 ttcatagtaaatatttttctttcagtctatcttatctatgatccaagaagagcagcagg 663
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 177 ttcatagtaaatatttttctttcagtctatcttatgtatgatccaagaagagcagcagg 119
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space: 689316
Effective search space used: 689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no138_a04.g1 MSMg01no138_a04.g1 CHROMAT_FILE:
MSMg01no138_a04.g1 PHD_FILE: MSMg01no138_a04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:54 2005
(636 letters)
>mm_chr12_60923884_60924920
Length = 1037
Score = 1222 bits (632), Expect = 0.0
Identities = 635/636 (99%), Gaps = 1/636 (0%)
Strand = Plus / Plus
Query: 1 cttttcagaa-cactgtctggtttcctggaaggcatccaagagaaggttttaaagaggga 59
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttttcagaaacactgtctggtttcctggaaggcatccaagagaaggttttaaagaggga 260
Query: 60 atgagataaaaaggaaactcaaagctcatctgcgaataggggaggtagctttggaagttg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgagataaaaaggaaactcaaagctcatctgcgaataggggaggtagctttggaagttg 320
Query: 120 atttgtttaagccattgaaaagatgaggccagccgaagagtagatggggaggtgggaagt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atttgtttaagccattgaaaagatgaggccagccgaagagtagatggggaggtgggaagt 380
Query: 180 aaggcaatctgtgcagggtcttgagaaaatctgccagaaaagaacaaggcagccaataat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaggcaatctgtgcagggtcttgagaaaatctgccagaaaagaacaaggcagccaataat 440
Query: 240 ggaaggcaaaagtagctgagctgatcggaagaaaccccgaggttttctccagtggggaaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggaaggcaaaagtagctgagctgatcggaagaaaccccgaggttttctccagtggggaaa 500
Query: 300 attccaagagaagttgtcaattctgttatacattgcctagaacatggtaagaatgagttg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attccaagagaagttgtcaattctgttatacattgcctagaacatggtaagaatgagttg 560
Query: 360 gaaagttgagcttatcattgtggcaacagatgctccactggcaactttaataggagtgat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaaagttgagcttatcattgtggcaacagatgctccactggcaactttaataggagtgat 620
Query: 420 tcatgttgttttgcattagagggtacagtggaactaagagaggaatactcacaggaagaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcatgttgttttgcattagagggtacagtggaactaagagaggaatactcacaggaagaa 680
Query: 480 cagaagataatgtctggggaatacactttgaaaagtatttctgaataagctgggcaatag 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cagaagataatgtctggggaatacactttgaaaagtatttctgaataagctgggcaatag 740
Query: 540 gtacatataagcggtgttaaaatcaatgcaggggtttcaaacgaaaggtgtgaagagtac 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gtacatataagcggtgttaaaatcaatgcaggggtttcaaacgaaaggtgtgaagagtac 800
Query: 600 taagaagaatctccacatgatgtaggtttgtcactt 635
||||||||||||||||||||||||||||||||||||
Sbjct: 801 taagaagaatctccacatgatgtaggtttgtcactt 836
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1037
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1027
Effective search space: 642902
Effective search space used: 642902
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
