Query= MSMg01no138_p21.b1 MSMg01no138_p21.b1 CHROMAT_FILE:
MSMg01no138_p21.b1 PHD_FILE: MSMg01no138_p21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:13 2005
(573 letters)
>mm_chr12_119380461_119381433
Length = 973
Score = 1007 bits (521), Expect = 0.0
Identities = 559/573 (97%), Gaps = 4/573 (0%)
Strand = Plus / Minus
Query: 3 gaattcctttatttattgcttttcttatagagatgggaaacttgctttgggaccttggca 62
||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 gaattcctttatttaacggttttcttatagagatgggaaacttgctttgggaccttggca 518
Query: 63 cttcattaatgaagttattgctcaccatgtttaatgccattatgaaagtataatgaacag 122
|||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 517 cttcattaatgaagttattgctaaccatgtttaatggcattatgaaagtataatgaacag 458
Query: 123 ctgcttataaggttggaagtcaccctaact--aagtgtcccttttcttcctctttatgaa 180
|||||||||||||||||||||| || | | ||||||||||||||||||||||||||||
Sbjct: 457 ctgcttataaggttggaagtca--cttagttaaagtgtcccttttcttcctctttatgaa 400
Query: 181 aatgtcaacatgcagattgaacacgggcatgaaattctgaacaagaatatgccattcacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 aatgtcaacatgcagattgaacacgggcatgaaattctgaacaagaatatgccattcacc 340
Query: 241 tctggaaatattaagtgggccagaatgctccttgaacgccttctaatgttctggtcaaac 300
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 339 tctggaaatattaagtgggccagaatgctccttgaacgccttcaaatgttctggtcaaac 280
Query: 301 tttacatctcttcattatctgtgagtagttagccttactctgtggtaaattgtgcagata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tttacatctcttcattatctgtgagtagttagccttactctgtggtaaattgtgcagata 220
Query: 361 ttataggtgtttgagtatcgagacaggatctctgcagcccacacggtcctcaaatgcgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 ttataggtgtttgagtatcgagacaggatctctgcagcccacacggtcctcaaatgcgtt 160
Query: 421 cattaggtagccaaggatgacctcaaagtcctgattttactgcctccagttctcagatgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 cattaggtagccaaggatgacctcaaagtcctgattttactgcctccagttctcagatgc 100
Query: 481 tagaatcataggcaagtatcaccacgcctggctgactttcactcaaggaagtggctgtca 540
|||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 99 tagaatcataggcaagtatcaccatgcctggctgactttcacacaaggaagtggctgtca 40
Query: 541 gtactaagcttgaggattcattggcctgctctg 573
|||||||||||||||||||||||||||||||||
Sbjct: 39 gtactaagcttgaggattcattggcctgctctg 7
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 973
Length adjustment: 10
Effective length of query: 563
Effective length of database: 963
Effective search space: 542169
Effective search space used: 542169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no138_p21.g1 MSMg01no138_p21.g1 CHROMAT_FILE:
MSMg01no138_p21.g1 PHD_FILE: MSMg01no138_p21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:13 2005
(592 letters)
>mm_chr12_119291468_119292459
Length = 992
Score = 1064 bits (550), Expect = 0.0
Identities = 583/597 (97%), Gaps = 5/597 (0%)
Strand = Plus / Plus
Query: 1 tcacttaaaactataaatattcttataatgtatataaggagacatttaattcttttgaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcacttaaaactataaatattcttataatgtatataaggagacatttaattcttttgaag 260
Query: 61 gcatgctaagtagttaaaagatgcactgttaatcctaaagacctgaaaatcaactgttaa 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcatgctaagtagttaaaagacgcactgttaatcctaaagacctgaaaatcaactgttaa 320
Query: 121 gcttgtagattatcctcagggaccaagaggaggttgagcaacacaaattatagcatgtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcttgtagattatcctcagggaccaagaggaggttgagcaacacaaattatagcatgtgt 380
Query: 181 gaagttcagggtgtccttacagataatgcccggaacaatacatgctaaaacacttgctaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaagttcagggtgtccttacagataatgcccggaacaatacatgctaaaacacttgctaa 440
Query: 241 tccagacaacaggataccttccataaaagatgtagatcaccaaaacaaatctaaagagaa 300
|||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tccagaaaacgggataccttccataaaagatgtagatcaccaaaacaaatctaaagagaa 500
Query: 301 ataaaatctcaataacttcctatctattaaagaaattcattactgaaaagattcccatga 360
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 501 ataaaatctcaataacttcctatctattaaagaaatccattactgaaaagattcccatga 560
Query: 361 agaaaaatattggtccagacactttcactgattaattctaccaaatactttagcaacaaa 420
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 561 agaaaaatattggtccagacactttcacggattaattctaccaaatactttagcaacaaa 620
Query: 421 taataccagtcccacgcaaagtattagaagcaagacacatgatggcagcatttctctgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 taataccagtcccacgcaaagtattagaagcaagacacatgatggcagcatttctctgat 680
Query: 481 gcaaaaatcaaacaggttacacagaaaacactacag-----tatgctctgtagtanagat 535
|||||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 681 gcaaaaatcaaacaggttacacagaaaacactacagaccagtatgctctgtagtaaagat 740
Query: 536 tttttaaaatatcgaataaaatcacagcatattgtattcagcaaatatgtaaaaaca 592
|||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 741 ttttaaaaatatcgaataaaatcacaacatattgtattcagcaaatatgtaagaaca 797
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 992
Length adjustment: 10
Effective length of query: 582
Effective length of database: 982
Effective search space: 571524
Effective search space used: 571524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
