Query= MSMg01no140_g04.b1 MSMg01no140_g04.b1 CHROMAT_FILE:
MSMg01no140_g04.b1 PHD_FILE: MSMg01no140_g04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:58:06 2005
(372 letters)
>mm_chr12_67662909_67663680
Length = 772
Score = 683 bits (353), Expect = 0.0
Identities = 365/369 (98%)
Strand = Plus / Plus
Query: 4 ggaattcactgtttgggctcaactgtctggacagtgagtccctaagatttccttgtacct 63
||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 204 ggaattcactgtttgggctaaactgtctggacagcgagtccctaagatttccttgtacct 263
Query: 64 ccagtgcaggggttacaaacaaatgcttcgaagctagtatttaaacatgggtattaggaa 123
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 264 ccagtgcaggggttacaaacaaatgcttcgaagctagtatttaaacatgggtgttaggaa 323
Query: 124 cccgaagttaggttgcagtatttattcagcaaacatttacatactcaatcatcttgcctg 183
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cccgaagttaggtcgcagtatttattcagcaaacatttacatactcaatcatcttgcctg 383
Query: 184 cctatttgttttctagcattttttattccagtagattgtgctagtgtttttaagttgtta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cctatttgttttctagcattttttattccagtagattgtgctagtgtttttaagttgtta 443
Query: 244 actactctagatatgtaactctggaagtctatttatgtcctctgtatccaatccctttga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 actactctagatatgtaactctggaagtctatttatgtcctctgtatccaatccctttga 503
Query: 304 tgtgtttattcatcattattcaaatctgcaccactttgattaaattggctttatagaggc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgtgtttattcatcattattcaaatctgcaccactttgattaaattggctttatagaggc 563
Query: 364 attgaagtg 372
|||||||||
Sbjct: 564 attgaagtg 572
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 772
Length adjustment: 9
Effective length of query: 363
Effective length of database: 763
Effective search space: 276969
Effective search space used: 276969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no140_g04.g1 MSMg01no140_g04.g1 CHROMAT_FILE:
MSMg01no140_g04.g1 PHD_FILE: MSMg01no140_g04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:58:06 2005
(246 letters)
>mm_chr12_67720592_67721238
Length = 647
Score = 439 bits (227), Expect = e-128
Identities = 242/247 (97%), Gaps = 1/247 (0%)
Strand = Plus / Minus
Query: 1 agatctgatataactaaaataaaacttatagtaattctcctgagtta-tttcttttctct 59
||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 447 agatctgatataactaaaataaaacttatagtaattctcctgagttatttttttttctct 388
Query: 60 tctaggaattcgtgttgcagctaccaaggttcctcacatctataaccaagctacactcat 119
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tctaggaactcgtgttgcagctaccaaggttcctcacatctataaccaagctacactcat 328
Query: 120 catttgaatttccttaccccagatatacatgtgaaactcagagagcaaattctggaatta 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 catttgaatttccttaccccagatatacatgtgaaactcagagagcaaattctggaatta 268
Query: 180 gaggttttatttaatacatacttttccacattccccatcttcatatttgatacgattaca 239
|||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 267 gaggctttatttaatacatacttttccacattccccatctttatatttgatacgattaca 208
Query: 240 aaaaacc 246
|||||||
Sbjct: 207 aaaaacc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 647
Length adjustment: 9
Effective length of query: 237
Effective length of database: 638
Effective search space: 151206
Effective search space used: 151206
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
