MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-141E04
Chromosome	12 (Build37)
Map Location	31,209,008 - 31,209,351
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Myt1l, LOC100043496, Pxdn, Tpo, Sntg2
Downstream gene	Tmem18, LOC100043055, Acp1, Sh3yl1, LOC629656, 9030611O19Rik, LOC668781, LOC100043065, LOC100043514, EG629667, LOC100043068, Lamb1-1, Dld, LOC668786, Slc26a3, Cbll1, Slc26a4
Link	Open Mouse BAC browser

Click to get alignment info.

name	Myt1l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17933 MGI:1100511
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043496 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043496
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Pxdn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69675 MGI:1916925
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tpo (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22018 MGI:98813
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sntg2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:268534 MGI:1919541
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:211986 MGI:2387176
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043055 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043055
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Acp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11431 MGI:87881
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sh3yl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:24057 MGI:1346118
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC629656 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:629656
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 25 ESTs, 11 Proteins pseudo : _no_value

name	9030611O19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:104943 MGI:1918813
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668781 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668781
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100043065 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043065
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100043514 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043514
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	EG629667 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:629667 MGI:3644833
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	LOC100043068 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043068
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 32 ESTs, 6 Proteins

name	Lamb1-1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16777 MGI:96743
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dld (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13382 MGI:107450
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668786 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668786
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 44 ESTs pseudo : _no_value

name	Slc26a3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13487 MGI:107181
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cbll1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:104836 MGI:2144842
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc26a4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23985 MGI:1346029
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Myt1l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385868 GeneID:17933 MGI:1100511
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myelin transcription factor 1-like transcript_id : NM_008666.2

name	LOC100043496 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262906 GeneID:100043496
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043496 transcript_id : XM_001480703.1

name	Pxdn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:75677554 GeneID:69675 MGI:1916925
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : peroxidasin homolog (Drosophila) transcript_id : NM_181395.1

name	Tpo (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24475906 GeneID:22018 MGI:98813
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thyroid peroxidase transcript_id : NM_009417.2

name	Sntg2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803313 GeneID:268534 MGI:1919541
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : syntrophin, gamma 2 transcript_id : NM_172951.2

name	Tmem18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:25286704 GeneID:211986 MGI:2387176
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 18 transcript_id : NM_172049.1

name	Acp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142369381 GeneID:11431 MGI:87881
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acid phosphatase 1, soluble transcript_id : NM_021330.3

name	Sh3yl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803283 GeneID:24057 MGI:1346118
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Sh3 domain YSC-like 1 transcript_id : NM_013709.4

name	9030611O19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560094 GeneID:104943 MGI:1918813
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9030611O19 gene transcript_id : NM_027828.2

name	EG629667 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149262909 GeneID:629667 MGI:3644833
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : predicted gene, EG629667 transcript_id : XM_894578.2

name	LOC100043068 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262831 GeneID:100043068
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 32 ESTs, 6 Proteins product : similar to Ribosomal protein L12 transcript_id : XM_001479442.1

name	Lamb1-1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114326496 GeneID:16777 MGI:96743
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : laminin B1 subunit 1 transcript_id : NM_008482.2

name	Dld (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801890 GeneID:13382 MGI:107450
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dihydrolipoamide dehydrogenase transcript_id : NM_007861.3

name	Slc26a3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130487 GeneID:13487 MGI:107181
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 26, member 3 transcript_id : NM_021353.2

name	Cbll1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19527263 GeneID:104836 MGI:2144842
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Casitas B-lineage lymphoma-like 1 transcript_id : NM_134048.1

name	Slc26a4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142364167 GeneID:23985 MGI:1346029
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 26, member 4 transcript_id : NM_011867.2

name	LOC100043496 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262907 GeneID:100043496
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480753.1

name	Myt1l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679000 GeneID:17933 MGI:1100511
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007399 - nervous system development [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : neural zinc finger transcription factor 1; postmeiotic neural gene 1; neural zinc finger protein NZF-1 product : myelin transcription factor 1-like protein_id : NP_032692.1

name	Pxdn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75677555 CCDS:CCDS25856.1 GeneID:69675 MGI:1916925
definition	GO_function : GO:0004601 - peroxidase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : peroxidasin protein_id : NP_852060.1

name	Tpo (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678417 CCDS:CCDS25857.1 GeneID:22018 MGI:98813
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0004447 - iodide peroxidase activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IEA] GO_process : GO:0042446 - hormone biosynthesis [Evidence IEA]; GO:0042744 - hydrogen peroxide catabolism [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA] codon_start : 1 product : thyroid peroxidase protein_id : NP_033443.1

name	Sntg2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370464 CCDS:CCDS25858.1 GeneID:268534 MGI:1919541
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : syntrophin, gamma 2 protein_id : NP_766539.1

name	Tmem18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:25286705 GeneID:211986 MGI:2387176
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] codon_start : 1 product : transmembrane protein 18 protein_id : NP_742046.1

name	Acp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542070 GeneID:11431 MGI:87881
definition	GO_function : GO:0003993 - acid phosphatase activity [Evidence IDA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004721 - phosphoprotein phosphatase activity [Evidence IEA]; GO:0016791 - phosphoric monoester hydrolase activity [Evidence IDA] codon_start : 1 product : acid phosphatase 1, soluble protein_id : NP_067305.2

name	Sh3yl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305487 CCDS:CCDS25859.1 GeneID:24057 MGI:1346118
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : Sh3 domain YSC-like 1 protein_id : NP_038737.1

name	9030611O19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560095 CCDS:CCDS25860.1 GeneID:104943 MGI:1918813
definition	codon_start : 1 product : hypothetical protein LOC104943 protein_id : NP_082104.2

name	EG629667 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149262910 GeneID:629667 MGI:3644833
definition	codon_start : 1 product : hypothetical protein protein_id : XP_899671.2

name	LOC100043068 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262832 GeneID:100043068
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479492.1

name	Lamb1-1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114326497 CCDS:CCDS25862.1 GeneID:16777 MGI:96743
definition	GO_component : GO:0005605 - basal lamina [Evidence IEA]; GO:0005604 - basement membrane [Evidence IDA]; GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IDA] GO_function : GO:0019899 - enzyme binding [Evidence IPI]; GO:0005201 - extracellular matrix structural constituent [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0007566 - embryo implantation [Evidence IMP] codon_start : 1 product : laminin B1 subunit 1 protein_id : NP_032508.2

name	Dld (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982856 GeneID:13382 MGI:107450
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]; GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]; GO:0050660 - FAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA] codon_start : 1 note : dihydrolipoyl dehydrogenase; branched chain alpha-keto acid dehydrogenase complex subunit E3 product : dihydrolipoamide dehydrogenase protein_id : NP_031887.2

name	Slc26a3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946676 CCDS:CCDS25863.1 GeneID:13487 MGI:107181
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015380 - anion exchanger activity [Evidence IDA]; GO:0015297 - antiporter activity [Evidence IEA]; GO:0031404 - chloride ion binding [Evidence IEA]; GO:0008271 - sulfate porter activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0008272 - sulfate transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : down-regulated in adenoma product : solute carrier family 26, member 3 protein_id : NP_067328.1

name	Cbll1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19527264 GeneID:104836 MGI:2144842
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004842 - ubiquitin-protein ligase activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007162 - negative regulation of cell adhesion [Evidence IDA]; GO:0030335 - positive regulation of cell migration [Evidence IDA]; GO:0045807 - positive regulation of endocytosis [Evidence IDA] codon_start : 1 note : E-cadherin binding protein E7 product : Casitas B-lineage lymphoma-like 1 protein_id : NP_598809.1

name	Slc26a4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755022 GeneID:23985 MGI:1346029
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008509 - anion transporter activity [Evidence ISS]; GO:0031404 - chloride ion binding [Evidence IEA]; GO:0008271 - sulfate porter activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0009887 - organ morphogenesis [Evidence ISS]; GO:0008272 - sulfate transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : Pendred's syndrome; Pendred syndrome homolog product : pendrin protein_id : NP_035997.1

name	LOC100043055 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043055
definition	number : 1 pseudo : _no_value

name	LOC668781 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668781
definition	number : 3 pseudo : _no_value

name	LOC668781 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668781
definition	number : 2 pseudo : _no_value

name	LOC668781 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668781
definition	number : 1 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 1 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 2 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 3 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 4 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 5 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 6 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 7 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 8 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 9 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 10 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 11 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 12 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 13 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 14 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 15 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 16 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 17 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 18 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 19 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 20 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 21 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 22 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 23 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 24 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 25 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 26 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 27 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 28 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 29 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 30 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 31 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 32 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 33 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 34 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 35 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 36 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 37 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 38 pseudo : _no_value

name	LOC100043514 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043514
definition	number : 1 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 39 pseudo : _no_value

name	LOC100043065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043065
definition	number : 40 pseudo : _no_value

name	LOC629656 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149262908 GeneID:629656
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 25 ESTs, 11 Proteins product : similar to Pyruvate kinase, muscle pseudo : _no_value transcript_id : XR_034817.1

name	LOC668786 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149262911 GeneID:668786
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 44 ESTs product : similar to tripartite motif protein 13 pseudo : _no_value transcript_id : XR_034822.1

clone name	MSMg01-237G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-198A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-199F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-212L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-205L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-198M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-235H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110F17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-267D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-235I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-049F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349B12
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-141E04.T7 (MSMg01no141_e04.b1)	MSMg01-141E04.TJ (MSMg01no141_e04.g1)
ACC	AG346182	AG346183
length	1,237	1,260
length of high quality (start - end)	359 (124 - 482)	---
definition	CHROMAT_FILE: MSMg01no141_e04.b1 PHD_FILE: MSMg01no141_e04.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:59:27 2005	CHROMAT_FILE: MSMg01no141_e04.g1 PHD_FILE: MSMg01no141_e04.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:59:27 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	CCTTCCCCTNNNNNTCATTGGGCGCTAAGACTCCTAAGGGAGAGGATCCG CGGAATTCCACCTCTAAAAATGTTTCATTTAGAGATAGGAGGATATAGAC ATCCTAGGAAATAGACCCCTTGAGCATTTTACTTCCCCAGAGGAGCTAAA TTAAATCCATAGTGGCTTTCTTTGGGAAATGCTCTCTGATGTCTAAGTAC AATGAGATGCATTATTATTCATGAGTTGCAAGATAGTTGGCAGTAGTGTT ATTTATACAAAGGATGCTTACTTCTGTTCCTAACCAACCAGGTCAAGGAA TAAAAAATCTTGAGAAATGCCACACTTTATTTTTATAATAAATTTTTTTA AAAAAGTCTTTAATTTAAAATTTCTAAATATTATCTTTTTAGAAAATGAT GTCCCTAATCCTGTAGAGACTTGATGCTCCAGGAAGGGGAATCTGGGAAA GAGTGAGGTAGGAGTGAGTGAGTGGGGGAGAGCNCTCCNCTTTTTTTTTT TNCTTTTTTTTCTTTTTTTTCTTTTTTTCTTTTTCTTTTTCCTCTTTTTT TTTCTTTTCTTTTTTTTTTTTTTTCCTCTTTTTTTTCCTCTTTTTCTTTC TTTTTTCCTTTTTTCTTCCTTTTCTTTTTTTTTTTTTCTTTCTTTTTTCC TTTTTCTTTTTTTTTTCTTTCCTTCTTTTTCTTCTCTTCCTTTTTTCTTT TTTTTCTTTTTTCCTTTCTTTTTTTTCCCCTTTTCTCTTTTTTTTTTCTT TTTTTTTTTTTTTCTTTCTTTTCTTCTTTCTTCTTTTTTTCTTTCTTTTT TTCTCTTCTCTTCTCCTTCTTCTTTTCTTTTTTTTTTCTTTTCTTTCTTT TTTTTTTCTTTTCCTTTTCTTTTTTTTTTCCTTTTTTTTTCTTCTTCTTT CTTCCTCTTTTTTTCCTCCTCTCTTTTTTTTTCTTTCTTTTTCTTTTTCT TCCTTTTCTTCTTTTTTTCTTTTCTTCTTTTCTTCCTTTCTTCTTTCTTT TTTCTTCCCTTTTCCCCTTCTTCTTTCCTCTTCTTTTTTTCTTCTCCNTT TTTTTTTTCTTTCTTCTTTNTTCTCTTTTTTTCTCTCTCTCTTTTTTCCT CCTTTTTCTCTTCCTCTCTTCTTCTTTTTCTTTCTTCCTTTTTTCCTCNT TCTCCTTTTTCTCTTCCTCTTTCTCATTTCTCTTNCTNTTCTTTTCTTTC TCNCTATCTNCCCCTTTTTTTCTTTTTTCTTTTTTTT	NCCGAAATTTTTTTNAAGAAAGGTAGGCTGGGGXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXCCCATAAAAGGTCCCCCNAGANA ANNNCCNNNGGCACAGAAGGACTTTAAAAATGTAACCANAACCTGATTAA AATGCAGAGAACAAGAAACTCTACTACNNCTAAAAAGAGAAAATTCAAAA AAAAGGTTCTGAAAAAAAGGTTAAGGGAAAATGGAAAAAAAAGGTTGAAA AAAATTTGGAAAAAAAAAAAAAAAAGGAGGGATTGAAAAAGAAGCTCCAA AAAAAGGAAAAAGGTTAAGCCAGAATATTATGGTTAAANAAAAAAGTAAA ANNNNNNNNNNNNNNCCCCGCGGTGTCTGAAAGAGGGGAGAAATTTTTTT TTNNATANNNNNNNNNNNNNNNNNNNNNTATCAAAAAAAAGGGTTTTTCC CCCCCTNNNNNNNTTTTTATTTTGAAAAGAGGGGGGGGGGGGGGGGGGGG NNTTTNNTTTTTTGGAGGTTTTGTGAGGAGAGAGAAAGGNAAGTNNNNNN NNNNNNNTTNNNNNNNNNTNNTNNNNNNNTNNNNNNNTTAANNNNNNNNT ANANNNNTNNTGTNNTANNNNNNNNNNNNNTNNNTNNTNNNNNNNNNNNN NNNNTNNNNNNNAAAANAGAAAAAATTAATATAAATATAAAAATTTATTT AAAANAATGTTTATTTTTTTAAAAGAGAAGAAAGGAGAAGATAANNANTA TAAATTAAGAGATTTGTATTATTTTAAATAAAAGAAAATATAATAGATTG GTTTTATATTATTAAATTTTAAATATATATTTTATTATAATTATATTATT TTGTAATTAATTAATGGATTTATATTTATTAATGTATAATTTATTGAGAG TTATAAAAGTTNNTNNNNNNNNNNNNNNNNNNNNNNANNNNNNNNNNNNN NNNNNNATTAATNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAAANAAGNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAANNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNANGGNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNN
quality values	Open. Hide. 9 9 10 9 9 6 6 8 3 0 0 0 0 0 3 6 6 6 6 6 8 9 10 10 8 8 8 8 8 19 19 8 8 8 8 8 8 19 21 28 20 24 24 33 34 37 47 50 50 48 50 50 50 53 47 37 50 53 50 35 35 35 35 28 24 14 14 12 26 22 34 27 16 9 9 9 9 9 12 10 8 8 7 7 7 10 10 10 19 26 37 39 50 50 53 53 53 53 53 53 53 53 53 53 53 47 53 41 50 33 33 37 37 25 25 18 16 22 22 17 19 10 10 10 15 26 43 33 33 31 30 22 22 15 10 10 10 12 12 12 28 30 47 47 33 33 33 36 36 50 47 47 47 47 47 57 57 50 50 43 43 48 37 33 34 36 43 43 48 57 54 46 46 36 46 46 46 59 43 48 48 57 48 57 57 57 57 57 54 54 54 57 57 57 57 57 57 57 57 57 57 54 57 57 43 43 43 57 57 54 54 54 59 57 57 57 57 57 57 54 59 57 59 54 59 57 57 59 50 50 43 43 46 52 52 52 59 59 52 52 52 52 50 52 37 37 52 52 52 52 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 59 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 57 57 57 52 52 52 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 68 68 68 68 68 68 68 68 68 59 59 37 32 20 20 20 20 18 18 18 18 44 44 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 54 59 54 54 48 46 43 47 47 39 35 35 32 32 32 39 43 47 59 48 48 48 59 59 59 48 48 48 48 39 39 47 59 41 40 34 25 16 9 3 0 3 6 8 3 0 3 9 15 15 10 10 10 11 11 9 12 3 0 3 8 9 10 12 15 11 13 8 8 8 8 8 12 10 12 12 10 12 8 8 10 13 13 8 8 6 6 8 6 8 9 9 9 9 10 19 16 12 9 9 10 10 14 13 11 13 10 12 10 10 8 8 10 8 8 6 6 8 8 10 8 8 11 11 13 11 12 12 10 8 8 8 8 8 8 10 10 12 10 13 13 12 12 10 8 8 12 8 8 12 8 10 10 10 10 8 8 8 8 8 8 12 12 13 10 10 10 12 9 8 8 6 6 8 8 8 8 10 10 13 10 10 13 10 8 8 8 8 8 8 8 10 8 8 8 8 8 8 7 7 8 8 14 13 10 9 9 9 9 8 10 8 10 8 10 13 9 9 17 10 8 8 8 7 7 12 8 8 8 15 8 8 12 12 10 10 10 10 10 10 8 8 6 6 6 6 8 8 10 15 9 9 9 9 9 9 15 10 12 10 8 8 8 9 10 13 13 14 12 10 9 8 10 8 10 8 12 8 13 9 7 7 10 10 10 10 9 10 9 8 8 6 6 6 6 11 11 14 18 10 10 9 8 8 6 6 7 7 12 12 10 10 9 10 10 10 10 11 11 19 15 15 19 13 8 8 7 8 8 8 8 8 10 8 8 8 8 8 8 10 15 13 14 10 15 8 6 6 8 10 11 12 9 13 10 10 8 10 8 8 8 8 9 8 8 6 6 8 8 10 8 8 8 8 8 9 10 10 10 10 12 11 6 6 8 8 9 10 10 11 17 15 13 8 6 6 10 8 10 10 10 13 13 10 12 10 12 10 9 9 10 10 8 8 11 12 13 13 8 8 8 8 8 8 10 8 8 8 10 8 8 8 8 10 17 8 10 6 6 10 12 18 13 10 10 8 8 8 8 8 10 10 8 8 8 8 6 6 8 8 8 8 8 8 8 8 9 15 13 13 16 12 12 10 9 8 8 6 6 10 10 20 15 10 10 10 12 12 14 16 13 12 9 9 8 11 8 8 6 6 10 7 8 8 8 12 12 9 9 9 8 8 6 6 6 8 8 9 10 10 13 12 11 10 8 8 8 8 18 13 11 8 8 10 13 17 16 14 10 10 11 10 10 9 10 8 6 6 10 10 10 8 8 6 6 8 8 10 9 9 9 9 9 8 8 8 8 8 8 8 8 8 8 10 8 8 8 8 11 10 16 18 17 9 9 9 13 10 8 6 6 8 8 10 15 10 15 15 15 9 9 9 11 3 0 3 9 20 11 22 17 22 13 10 9 8 8 15 8 9 8 8 8 8 11 3 0 3 11 12 10 10 8 14 10 11 10 10 7 10 7 7 6 6 9 9 9 10 12 9 9 9 12 10 8 8 8 11 10 10 11 11 10 10 10 10 8 8 8 10 10 10 10 10 12 10 12 9 9 14 10 10 10 13 13 10 12 15 8 8 6 6 8 8 11 15 11 11 12 18 15 10 10 9 3 0 3 6 6 8 8 9 10 10 10 10 9 10 8 8 8 8 8 8 8 8 8 8 9 9 9 9 9 9 9 9 9 9 8 8 3 0 3 3 0 3 8 8 8 8 8 10 11 12 15 18 15 11 3 0 3 6 6 6 8 3 0 3 11 11 11 8 8 8 11 11 6 11 7 7 8 8 12 12 10 10 11 19 15 19 19 19 15 14	Open. Hide. 0 3 9 9 10 11 11 14 20 18 14 23 21 3 0 3 6 6 6 7 7 6 6 6 6 6 6 8 6 6 6 7 12 13 10 8 6 6 6 6 8 9 17 19 19 14 17 19 21 8 9 8 9 8 9 9 15 10 8 8 9 15 16 24 26 29 25 24 24 16 10 17 9 7 8 6 8 13 11 9 10 9 10 15 11 7 7 9 8 8 9 9 9 3 0 3 23 3 0 3 3 0 0 0 3 3 0 0 0 3 7 7 8 21 13 9 7 7 6 6 7 9 12 13 19 19 13 17 9 8 6 6 6 6 6 6 8 3 0 3 6 6 6 6 11 10 10 9 10 15 17 11 11 9 9 9 9 9 10 9 9 9 9 9 10 8 8 8 8 6 8 9 9 6 8 6 3 0 0 3 10 10 11 12 12 8 6 6 6 6 8 8 8 8 9 9 9 10 10 12 21 24 26 10 13 8 9 8 10 10 10 8 8 10 8 8 15 12 11 9 8 8 8 8 8 10 11 9 9 8 11 10 10 10 10 16 19 12 12 17 16 10 8 8 8 8 8 10 10 8 9 12 11 9 9 11 12 12 15 11 18 26 13 11 10 13 11 12 17 29 32 18 14 13 10 13 9 11 11 17 12 15 14 12 12 15 21 16 8 8 8 8 8 8 8 8 8 8 6 12 16 27 26 16 13 12 11 10 10 9 8 8 7 8 10 10 8 9 9 8 8 6 7 7 7 10 10 10 10 10 8 8 6 6 6 6 6 3 0 3 8 17 26 17 8 8 6 6 6 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 9 7 7 7 7 7 8 6 6 6 6 6 6 9 13 8 8 9 9 9 8 8 6 6 6 8 8 10 14 26 28 32 32 16 18 3 0 0 3 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 6 6 6 8 8 20 17 12 12 9 9 9 9 9 9 10 10 9 6 8 8 10 9 7 10 3 0 0 0 0 0 0 0 3 11 8 8 7 8 7 8 11 12 9 11 10 10 8 8 8 8 10 10 15 17 24 16 16 17 15 10 9 10 9 10 9 14 13 11 3 0 0 3 15 3 0 0 3 17 19 16 9 9 9 9 10 9 8 8 7 7 8 8 6 6 8 8 7 8 8 8 8 10 10 8 8 6 6 3 0 3 6 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 0 0 0 0 0 0 0 3 0 0 3 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 3 6 6 3 0 0 0 0 0 0 0 0 3 3 0 3 0 0 0 0 3 0 0 3 11 3 0 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 3 11 13 3 0 3 9 9 12 18 11 12 11 7 8 8 8 8 7 7 7 8 11 12 10 10 8 8 10 8 8 7 8 8 9 6 6 6 6 6 6 3 0 3 13 8 8 8 13 7 9 6 17 10 11 11 11 15 16 13 15 16 8 8 6 6 8 8 13 17 10 9 9 9 10 11 11 11 9 9 9 3 0 0 3 0 3 8 8 8 8 8 8 8 12 8 8 8 8 8 11 17 11 9 9 9 8 11 17 10 10 10 10 8 8 7 6 8 8 10 9 9 9 15 12 11 8 8 6 6 8 8 8 8 8 8 8 8 6 6 8 8 15 16 25 10 8 8 8 8 8 8 6 6 6 8 8 8 8 10 6 6 8 8 10 8 11 11 17 13 10 9 12 12 10 15 10 8 8 8 10 10 8 9 11 12 9 9 13 8 8 10 14 15 15 10 12 9 14 15 17 8 8 8 8 6 7 8 10 10 10 8 8 8 8 10 12 13 15 9 9 9 9 9 17 17 10 8 8 7 7 8 8 8 8 8 8 8 6 6 8 6 8 10 8 8 8 8 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 8 6 6 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 6 6 3 0 3 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no141_e04.b1 MSMg01no141_e04.b1 CHROMAT_FILE:
MSMg01no141_e04.b1 PHD_FILE: MSMg01no141_e04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:59:27 2005
         (359 letters)



>mm_chr12_31208950_31209708
          Length = 759

 Score =  665 bits (344), Expect = 0.0
 Identities = 344/344 (100%)
 Strand = Plus / Minus

                                                                       
Query: 16  agaggagctaaattaaatccatagtggctttctttgggaaatgctctctgatgtctaagt 75
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 agaggagctaaattaaatccatagtggctttctttgggaaatgctctctgatgtctaagt 343

                                                                       
Query: 76  acaatgagatgcattattattcatgagttgcaagatagttggcagtagtgttatttatac 135
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 acaatgagatgcattattattcatgagttgcaagatagttggcagtagtgttatttatac 283

                                                                       
Query: 136 aaaggatgcttacttctgttcctaaccaaccaggtcaaggaataaaaaatcttgagaaat 195
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 aaaggatgcttacttctgttcctaaccaaccaggtcaaggaataaaaaatcttgagaaat 223

                                                                       
Query: 196 gccacactttatttttataataaatttttttaaaaaagtctttaatttaaaatttctaaa 255
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 gccacactttatttttataataaatttttttaaaaaagtctttaatttaaaatttctaaa 163

                                                                       
Query: 256 tattatctttttagaaaatgatgtccctaatcctgtagagacttgatgctccaggaaggg 315
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 tattatctttttagaaaatgatgtccctaatcctgtagagacttgatgctccaggaaggg 103

                                                       
Query: 316 gaatctgggaaagagtgaggtaggagtgagtgagtgggggagag 359
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 gaatctgggaaagagtgaggtaggagtgagtgagtgggggagag 59


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 359
Length of database: 759
Length adjustment: 9
Effective length of query: 350
Effective length of database: 750
Effective search space:   262500
Effective search space used:   262500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information