Query= MSMg01no145_c15.b1 MSMg01no145_c15.b1 CHROMAT_FILE:
MSMg01no145_c15.b1 PHD_FILE: MSMg01no145_c15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:11 2005
(623 letters)
>mm_chr12_35076842_35077864
Length = 1023
Score = 1135 bits (587), Expect = 0.0
Identities = 613/622 (98%)
Strand = Plus / Minus
Query: 1 atacctatctggaaggctctccaagcacaacactttattattcctaggagacttcaatag 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 822 atacctatctggaaggctctccaagcacaacactttattattcccaggagacttcaatag 763
Query: 61 aattacttagtttaaaaaatcttggcagctgaaataggatcttcaggaggagtaattgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 aattacttagtttaaaaaatcttggcagctgaaataggatcttcaggaggagtaattgtc 703
Query: 121 ctagtctaaaggaagacaaaaataattttatatacattctctaaaataatatgtattttg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 ttagtctaaaggaagacaaaaataattttatatacattctctaaaataatatgtattttg 643
Query: 181 cttgttacaaaatattaatcagctttacatagaataattcatcacagatgttagtaaatt 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 642 cttgttacaaaatattaatcagctttacataggataattcatcacagatgttagtaaatt 583
Query: 241 aaaccttccatacatagaagtcagatgctagatactggaagtaaaggctgtccccacccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 aaaccttccatacatagaagtcagatgctagatactggaagtaaaggctgtccccacccc 523
Query: 301 tgccaccagtgtcagcactcagtgtcaagccttctccaaagtgcaccacgtcagactcac 360
||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 522 tgccaccagtgtcagcactcagtgtcaagccttctccaaagtgcagtatgtcagactcac 463
Query: 361 atatatctttgagacagatattttttattagatctaaaatcttattacatctggattact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 atatatctttgagacagatattttttattagatctaaaatcttattacatctggattact 403
Query: 421 aatagaatataatgtcatctttctatgatcatataccatatgtaaagagaaggcaaattt 480
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 402 aatagaatataatgtcatctttctatgatcatataccatatgtgaagagaaggcaaattt 343
Query: 481 aggatgtgacctttataatctaagatttacaaatganaagcatgaaaatcctaaatcatt 540
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 342 aggatgtgacctttataatctaagatttacaaatgaaaagcatgaaaatcctaaatcatt 283
Query: 541 tacactcttgaaattccaaggatgtgtaaacagttgattttaatgaaatgcaaaatagaa 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 282 tacactcttgaaattccaaggatgtgtaaacagttgattttaatgaaatgcaaaatggaa 223
Query: 601 gtaaaactgaaatcataagtaa 622
||||||||||||||||||||||
Sbjct: 222 gtaaaactgaaatcataagtaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1023
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1013
Effective search space: 620969
Effective search space used: 620969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no145_c15.g1 MSMg01no145_c15.g1 CHROMAT_FILE:
MSMg01no145_c15.g1 PHD_FILE: MSMg01no145_c15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:11 2005
(600 letters)
>mm_chr12_34955143_34956143
Length = 1001
Score = 1123 bits (581), Expect = 0.0
Identities = 596/601 (99%), Gaps = 1/601 (0%)
Strand = Plus / Plus
Query: 1 tctcaggtagcgtgactcttttaaaacagttatctactgtgagtcaaatatatctgcaca 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctcaggtagagtgactcttttaaaacagttatctactgtgagtcaaatatatctgcaca 260
Query: 61 gagcattttggtttggtgacgtagaaagtaaatctatatttttaggttgttagagtaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagcattttggtttggtgacgtagaaagtaaatctatatttttaggttgttagagtaatt 320
Query: 121 ctacttgattaaatatttaaatactctttttaaacttttgaatagcttattctgtcttaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctacttgattaaatatttaaatactctttttaaacttttgaatagcttattctgtcttaa 380
Query: 181 gctctatatgttgagtgaactggcagctacaaatcaaattcattcattctttttttt-cc 239
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 381 gctctatatgttgagtgaactggcagctacaaatcaaattcattctttctttttttttcc 440
Query: 240 ttcctttttagttaaaattattactttgtttcatttaatggatatttgagaagcttaata 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcctttttagttaaaattattactttgtttcatttaatggatatttgagaagcttaata 500
Query: 300 tttttctattctgaactcttcactcttagggttagattcagaaacactaatagttttgtt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttttctattctgaactcttcactcttagggttagattcagaaacactaatagttttgtt 560
Query: 360 tctggccatgaagacagaggggggggggagtagaaaggtcacagaaaggaaaatctaatt 419
|||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tctggccatggagacagaagggggggggagtagaaaggtcacagaaaggaaaatctaatt 620
Query: 420 tattggcagttccagtggaggataataaagtcaaatgtgtcatcctataaatagctttgg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tattggcagttccagtggaggataataaagtcaaatgtgtcatcctataaatagctttgg 680
Query: 480 gcagcatctcacaagtcagtggtaatgctggtgtgcctcctcagggctacactttaccca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gcagcatctcacaagtcagtggtaatgctggtgtgcctcctcagggctacactttaccca 740
Query: 540 ttttaacactgcacggtgcatgactaattgctgttgcaagagaaggatctgagctttaaa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttttaacactgcacggtgcatgactaattgctgttgcaagagaaggatctgagctttaaa 800
Query: 600 g 600
|
Sbjct: 801 g 801
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 600
Length of database: 1001
Length adjustment: 10
Effective length of query: 590
Effective length of database: 991
Effective search space: 584690
Effective search space used: 584690
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
