Query= MSMg01no146_f10.b1 MSMg01no146_f10.b1 CHROMAT_FILE:
MSMg01no146_f10.b1 PHD_FILE: MSMg01no146_f10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:08:00 2005
(475 letters)
>mm_chr12_26808100_26808974
Length = 875
Score = 849 bits (439), Expect = 0.0
Identities = 467/477 (97%), Gaps = 4/477 (0%)
Strand = Plus / Plus
Query: 1 caattatcgcccatatacatcaaaata-c-cttttttgatatttatacccacctcagatc 58
||||||||||||||||||||||||||| | | ||| |||||||||| | ||||||||
Sbjct: 201 caattatcgcccatatacatcaaaataacacattt--gatatttatatttatctcagatc 258
Query: 59 tgccatttaacacctccatgttgtactctgttttcttcctaagactgcattccaaaatac 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tgccatttaacacctccatgttgtactctgttttcttcctaagactgcattccaaaatac 318
Query: 119 agtctatagtccaagttaaaaaaaaaaaagtagatatggtgttcatattgcaaactcagt 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 agtctatagtccaagttaaaaaaaaaaaagtagatatggtgttcatattgcaaactcagt 378
Query: 179 atgttcagtggaatgtttgttgggattctgtgcccatttacctggtacctagcctagaat 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 atgttcagtggaatgtttgttgggattctgtgcccatttacctggtacctagcctagaat 438
Query: 239 atgcaaggtgcccagcacatatcctcacagccattccaatgagtctctttaaaggttttt 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 atgcaaggtgcccagcacatatcctcacagccattccaatgagtctctttaaaggttttt 498
Query: 299 aaatttctacattgtttgtttttatatttgtgatggtttgtatatccttggaccagagag 358
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 aaatttctacattgtttggttttatatttgtgatggtttgtatatccttggaccagagag 558
Query: 359 tggcaacatctgaaggtatggccttgttggaataggtgtgacctggttggaatgggtgtg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tggcaacatctgaaggtatggccttgttggaataggtgtgacctggttggaatgggtgtg 618
Query: 419 tcactgtgggtgtgggtataagatcctcaccctagttgcctggaagtcagtcttcca 475
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tcactgtgggtgtgggtataagatcctcaccctagttgcctggaagtcagtcttcca 675
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 875
Length adjustment: 10
Effective length of query: 465
Effective length of database: 865
Effective search space: 402225
Effective search space used: 402225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no146_f10.g1 MSMg01no146_f10.g1 CHROMAT_FILE:
MSMg01no146_f10.g1 PHD_FILE: MSMg01no146_f10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:08:00 2005
(466 letters)
>mm_chr12_26954906_26955771
Length = 866
Score = 882 bits (456), Expect = 0.0
Identities = 456/456 (100%)
Strand = Plus / Minus
Query: 11 attgaactctattgactttggctttgtttgtttgttacattttttgagatcatgactcct 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 attgaactctattgactttggctttgtttgtttgttacattttttgagatcatgactcct 807
Query: 71 gtagccaagtttggtctcagactcctcatataactgagaatggccttgaacttctgatct 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 gtagccaagtttggtctcagactcctcatataactgagaatggccttgaacttctgatct 747
Query: 131 tcttgcttcttcctgttgggattgctggcctgtagcaacatgcctggtttatgcagtggc 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 tcttgcttcttcctgttgggattgctggcctgtagcaacatgcctggtttatgcagtggc 687
Query: 191 tctgagggacagaactagggaagccctctatgagcttaagcaccagattcccactgtggc 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 tctgagggacagaactagggaagccctctatgagcttaagcaccagattcccactgtggc 627
Query: 251 tctaaattgcattttattccatatttggcctctcggtatgcatgaacccatccatatcca 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 tctaaattgcattttattccatatttggcctctcggtatgcatgaacccatccatatcca 567
Query: 311 aacccctggatgtctggccggcctcacaccttcatgttatgtaaaggggaatctcattca 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 aacccctggatgtctggccggcctcacaccttcatgttatgtaaaggggaatctcattca 507
Query: 371 ttcaagcagaatccatgtacaggtaacatacaagacctgagcagaggcagactcaataca 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ttcaagcagaatccatgtacaggtaacatacaagacctgagcagaggcagactcaataca 447
Query: 431 tcaacctaaagggagaaggctggacccttgtcatag 466
||||||||||||||||||||||||||||||||||||
Sbjct: 446 tcaacctaaagggagaaggctggacccttgtcatag 411
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space: 390336
Effective search space used: 390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
