CGTACTCCTNNNAAACACTGGGCGCTATAGACTCCTATAGGGAGAGGATC
CGCGGAATTCTTCTGAGAGGAGGTTCCGTTAAGCCCCGCCGAAAAANAGA
CCTGGGGAATGGTCACCCTTTTCCGCTCTGGAACCCCAATCTGGGGGCTG
TTTTCTGACCTCTCAGGGTACAGCGCTGAACTGGAGAAAGAGTTCAGACT
CACTTTTTCTTCCTTCTTTTGACTGCATCAACACGTTCCCTCACCTGCCT
TGGATCAGAAGCACAAATGAATGCATCCTTGTTGTGAATCCGTAGACAAA
GGTTGGGTATTGAAAATGACTGAGCTGCGGAGCCCTAGAAAGGGATTATG
CTAACCCTGGGGATTTCTAGGGACAAGGAGGGAAAATCCGAGCAGAAGCT
ATTATCTCAGGGAGAGTGGAGCCTACAAAGGCTGAGGTGACCCTCCCTGC
TTTGAGATCTCACCTTCATTTGGAGGTGTCACCTGGACTCTCCGAAGCTT
CATCTAAGCAAATGTTCCTGCAATAATAGACTCTCCATCCTTACAGGGCT
CCAACTGGTGCTGATGTCCCTGCATTCTCTAAGGACCAATGCTCCAGGCC
TGCTCACCTGATACTGGCTCCGTGATGCTGCGGGCCCATTAGAACCCAGT
AAACCTGGTTCGCCCTCATCTGTAAATCATGTGTTAACTCTCATTATATG
ATTGGCAGCTCTCCTAGAGGATAATGTGCTCTTCGTGGGGACCTGAAGGA
GACTTCACCTCTCCCCTATCACTTCCCTCCTCCTCTTTATATCTGGGGAC
GGAGGTGGAGGTCACTCTGTCTCCAGTGTCTCCCTATATAACCTGAGCTG
TCCAGAGAATAGCCTTCTTGGTACCCCCTGAATCTTAGTTTTAAAGATAA
TTTCTCAAACCGAATAAGCTTAATTTACATCCTTTTCCACCCTTTCCCTC
CCTTTCTTACTTCCCGTCTCTCTCTTTCCTTTTTTATGGGTTAAGTTTCC
CTTATTGCACGGCCTTTGCTTGTTTTGTTCCGTGGTCTATTTTCCCTTCA
CCATATTGGGTGACTCTATCTCTGGAAAATTAACTTTTTTTCCCTTTCTC
CCCCCTTTTATTTTTATGGCCATGCTCCTCTTTTCTCTTGGGGGCCTAAA
CCCTTTTATTGTTCCCCCCATTTCTTTTCATTTCTTTGCTCCTCCGTCTA
ACTTCTCCTCTTACTCTGTAACCTAATTTTCTCTT

TCCCCCTCTTTAACCCACGCGAGCCTGGGGXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXGCCAATACAGACCCCCCAGAACCATTA
NCAGGGNCAAATGTACCCTTAAGGTCCCCACAAGCCCAGATGTCATTCAG
GAAACTAGCACTTAGCTTGTGAAAGCCTTGAAAACCACAGGTTTGCAGGA
CCAGTAGTCAAGCTCTGAGGTAGACATTTGATAAGTCACTGAGGTACAAG
GAAGGGGAAGCAGCTATCAGAACCTTTCTTTGGAGAGAAGAATGCTAGAG
GAGGGGTGGGCCAGTCACAGGGTCAAGAGGAGATCTGAGCATGTTGATCA
CCCACAGAGATAATTTTCAAAAAGTTGTTTATTACAAACCACATCTTCCC
TCTTATATTAATGTCTGAAAAGCTTTGGCAAGAGCAGACCGTCAAATCTC
CCTCGAGTTATTAAGTCAAGCCGTGGGCTTTCAGAACATAGGAAGTTCAA
AAGGCTGTCAGGTTAGAGCCAGACAGCTAGGAATGTGCATGCCCCTCAGA
GGAGGTGCATATCCATTAAGGTGTATCGGGTAGCCCTTATCAGAGAGCCT
CATCAGCCAGCCAAAGGACAGGTTACTGTGTGTGCCAGGTCAGAATTGGC
CCCTCCAAAGTTAACTGAAAGCAGTGGGCCCAACCCTCCTTTAAGCCCTT
TGTTCAAGCCCAAGCTAAGGACACAGTACTTTAGGGCAGAAAACAGATCC
ATAAGAAGATTCCCGATGCTAATGGGGCCACTAGTAGTTCATCCTGAACC
TGTGCTTTGTCTGTCACTAGGAACAGCAGCCTTTTAGAAGATATGACTCA
GCCCTGTCAGGAGGAATCTTAGTTGCAACCGACAATGCCATTCCTTCATG
GGGTTCTTTAATGCTTTTTGAGACTCTTCCTAAATGGTCCTAAATTGTGC
CCAATCCTACATAGTTATGGTCATAATGGCAAGAATTCCCCAGCGTTATT
CCTTCATTATACCAAAAGGTTCCCACCCCCCTCTTTATCCTGTCTTTTCC
CGGGGAGGAAATCCTCCCCTTTCCACTCCACTAAAGGGCTTGGTCTTTCC
CCTATATTACAGTCTCACTAACGGTGGTTCCCCTCCTTTTTTTCCCAATT
TTCCCCCCTACTTTCTCCAAATCTAAAGTTGCGTCTTTTCTCGACCCTAC
CAATTTATGTTTGTCCT

Query= MSMg01no146_h02.b1 MSMg01no146_h02.b1 CHROMAT_FILE:
MSMg01no146_h02.b1 PHD_FILE: MSMg01no146_h02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:08:13 2005
         (127 letters)



>mm_chr12_108755788_108756314
          Length = 527

 Score =  238 bits (123), Expect = 1e-67
 Identities = 126/127 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   atctgggggctgttttctgacctctcagggtacagcgctgaactggagaaagagttcaga 60
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 atctgggggttgttttctgacctctcagggtacagcgctgaactggagaaagagttcaga 268

                                                                       
Query: 61  ctcactttttcttccttcttttgactgcatcaacacgttccctcacctgccttggatcag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ctcactttttcttccttcttttgactgcatcaacacgttccctcacctgccttggatcag 208

                  
Query: 121 aagcaca 127
           |||||||
Sbjct: 207 aagcaca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 127
Length of database: 527
Length adjustment: 8
Effective length of query: 119
Effective length of database: 519
Effective search space:    61761
Effective search space used:    61761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no146_h02.g1 MSMg01no146_h02.g1 CHROMAT_FILE:
MSMg01no146_h02.g1 PHD_FILE: MSMg01no146_h02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:08:13 2005
         (491 letters)



>mm_chr12_108613494_108614384
          Length = 891

 Score =  895 bits (463), Expect = 0.0
 Identities = 484/491 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   agatgtcattcaggaaactagcacttagcttgtgaaagccttgaaaaccacaggtttgca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agatgtcattcaggaaactagcacttagcttgtgaaagccttgaaaaccacaggtttgca 260

                                                                       
Query: 61  ggaccagtagtcaagctctgaggtagacatttgataagtcactgaggtacaaggaagggg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 ggaccagtagtcaagctctgaggtagacatttgataagtcactgaggtagaaggaagggg 320

                                                                       
Query: 121 aagcagctatcagaacctttctttggagagaagaatgctagaggaggggtgggccagtca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagcagctatcagaacctttctttggagagaagaatgctagaggaggggtgggccagtca 380

                                                                       
Query: 181 cagggtcaagaggagatctgagcatgttgatcacccacagagataattttcaaaaagttg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagggtcaagaggagatctgagcatgttgatcacccacagagataattttcaaaaagttg 440

                                                                       
Query: 241 tttattacaaaccacatcttccctcttatattaatgtctgaaaagctttggcaagagcag 300
           |||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||| 
Sbjct: 441 tttattacaaaccacatcttccctcttagaggaatgtctgaaaagctttggcaagagcat 500

                                                                       
Query: 301 accgtcaaatctccctcgagttattaagtcaagccgtgggctttcagaacataggaagtt 360
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 accgtcaaatctccctcaagttattaagtcaagccgtgggctttcagaacataggaagtt 560

                                                                       
Query: 361 caaaaggctgtcaggttagagccagacagctaggaatgtgcatgcccctcagaggaggtg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caaaaggctgtcaggttagagccagacagctaggaatgtgcatgcccctcagaggaggtg 620

                                                                       
Query: 421 catatccattaaggtgtatcgggtagcccttatcagagagcctcatcagccagccaaagg 480
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 621 catatccattaaggtgtatcaggtagcccttatcagagagcctcatcagccagccaaagg 680

                      
Query: 481 acaggttactg 491
           |||||||||||
Sbjct: 681 acaggttactg 691


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 491
Length of database: 891
Length adjustment: 10
Effective length of query: 481
Effective length of database: 881
Effective search space:   423761
Effective search space used:   423761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)