MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-148I22
Chromosome	12 (Build37)
Map Location	77,047,008 - 77,047,653
singlet/doublet	singlet
Overlap gene	Syne2
Upstream gene	Kcnh5, Rhoj, Gphb5, Ppp2r5e, Wdr89, LOC665931, Sgpp1
Downstream gene	Esr2, LOC665957, Tex21, Mthfd1, Akap5, Zbtb25, Zbtb1, Hspa2, Gm70, LOC100041694, Plekhg3, Spnb1, Churc1, Gpx2, Rab15, Fntb, Max
Link	Open Mouse BAC browser

Click to get alignment info.

name	Kcnh5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238271 MGI:3584508
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rhoj (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:80837 MGI:1931551
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gphb5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217674 MGI:2156540
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppp2r5e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26932 MGI:1349473
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wdr89 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72338 MGI:1919588
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 55 ESTs, 4 Proteins

name	LOC665931 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665931
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 1001 ESTs, 9 Proteins

name	Sgpp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:81535 MGI:2135760
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Syne2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319565 MGI:2449316
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 146 ESTs, 5 Proteins

name	Esr2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13983 MGI:109392
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC665957 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665957
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 146 ESTs, 2 Proteins pseudo : _no_value

name	Tex21 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:80384 MGI:1931131
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mthfd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108156 MGI:1342005
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Akap5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238276 MGI:2685104
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 1 Protein

name	Zbtb25 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109929 MGI:99197
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zbtb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:268564 MGI:2442326
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hspa2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15512 MGI:96243
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Gm70 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:210762 MGI:2684916
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 ESTs, 1 Protein

name	LOC100041694 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041694
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 ESTs

name	Plekhg3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:263406 MGI:2388284
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Spnb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20741 MGI:98387
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Churc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:211151 MGI:1923684
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpx2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14776 MGI:106609
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rab15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:104886 MGI:1916865
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fntb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110606 MGI:1861305
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Max (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17187 MGI:96921
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kcnh5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142382566 GeneID:238271 MGI:3584508
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium voltage-gated channel, subfamily H (eag-related), member 5 transcript_id : NM_172805.2

name	Rhoj (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70980541 GeneID:80837 MGI:1931551
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ras homolog gene family, member J transcript_id : NM_023275.2

name	Gphb5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130284 GeneID:217674 MGI:2156540
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glycoprotein hormone beta 5 transcript_id : NM_175644.3

name	Ppp2r5e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:55741699 GeneID:26932 MGI:1349473
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein phosphatase 2, regulatory subunit B (B56), epsilon isoform transcript_id : NM_012024.2

name	Wdr89 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263313 GeneID:72338 MGI:1919588
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 55 ESTs, 4 Proteins product : WD repeat domain 89, transcript variant 2 transcript_id : XM_001476717.1

name	Wdr89 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263311 GeneID:72338 MGI:1919588
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 22 ESTs, 4 Proteins product : WD repeat domain 89, transcript variant 1 transcript_id : XM_001476702.1

name	Sgpp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543695 GeneID:81535 MGI:2135760
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sphingosine-1-phosphate phosphatase 1 transcript_id : NM_030750.2

name	Syne2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263316 GeneID:319565 MGI:2449316
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 146 ESTs, 5 Proteins product : synaptic nuclear envelope 2 transcript_id : XM_917083.3

name	Esr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46877093 GeneID:13983 MGI:109392
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : estrogen receptor 2 (beta) transcript_id : NM_010157.3

name	Esr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46877095 GeneID:13983 MGI:109392
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : estrogen receptor 2 (beta) transcript_id : NM_207707.1

name	Tex21 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142352190 GeneID:80384 MGI:1931131
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : testis expressed gene 21 transcript_id : NM_019784.4

name	Mthfd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:20270274 GeneID:108156 MGI:1342005
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase transcript_id : NM_138745.1

name	Akap5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263321 GeneID:238276 MGI:2685104
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 1 Protein product : A kinase (PRKA) anchor protein 5, transcript variant 1 transcript_id : XM_138063.7

name	Zbtb25 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61098361 GeneID:109929 MGI:99197
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger and BTB domain containing 25 transcript_id : NM_028356.1

name	Zbtb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:30520188 GeneID:268564 MGI:2442326
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger and BTB domain containing 1 transcript_id : NM_178744.1

name	Hspa2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:50345977 GeneID:15512 MGI:96243
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heat shock protein 2 transcript_id : NM_001002012.1

name	Hspa2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:93004086 GeneID:15512 MGI:96243
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heat shock protein 2 transcript_id : NM_008301.4

name	Gm70 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94392974 GeneID:210762 MGI:2684916
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 ESTs, 1 Protein product : gene model 70, (NCBI), transcript variant 2 transcript_id : XM_898829.2

name	LOC100041694 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263324 GeneID:100041694
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 ESTs product : hypothetical protein LOC100041694 transcript_id : XM_001477001.1

name	Plekhg3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83165283 GeneID:263406 MGI:2388284
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pleckstrin homology domain containing, family G (with RhoGef domain) member 3 transcript_id : NM_153804.3

name	Spnb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84490393 GeneID:20741 MGI:98387
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : spectrin beta 1 transcript_id : NM_013675.3

name	Churc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124249114 GeneID:211151 MGI:1923684
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : churchill domain containing 1 transcript_id : NM_206534.1

name	Gpx2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:17432428 GeneID:14776 MGI:106609
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutathione peroxidase 2 transcript_id : NM_030677.1

name	Rab15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348473 GeneID:104886 MGI:1916865
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAB15, member RAS oncogene family transcript_id : NM_134050.3

name	Fntb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130233 GeneID:110606 MGI:1861305
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : farnesyltransferase, CAAX box, beta transcript_id : NM_145927.2

name	Max (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678815 GeneID:17187 MGI:96921
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Max protein transcript_id : NM_008558.1

name	Kcnh5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370198 CCDS:CCDS25980.1 GeneID:238271 MGI:3584508
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005516 - calmodulin binding [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005267 - potassium channel activity [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0000155 - two-component sensor activity [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA]; GO:0005249 - voltage-gated potassium channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0006810 - transport [Evidence IEA]; GO:0000160 - two-component signal transduction system (phosphorelay) [Evidence IEA] codon_start : 1 exception : mismatches in translation note : potassium channel Eag2 product : potassium voltage-gated channel, subfamily H, member 5 protein_id : NP_766393.1

name	Rhoj (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13489097 CCDS:CCDS25981.1 GeneID:80837 MGI:1931551
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence ISS]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0030036 - actin cytoskeleton organization and biogenesis [Evidence IDA]; GO:0008360 - regulation of cell shape [Evidence IDA]; GO:0007266 - Rho protein signal transduction [Evidence IDA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA] codon_start : 1 note : TC10-like Rho GTPase product : ras homolog gene family, member J protein_id : NP_075764.1

name	Gphb5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75905499 CCDS:CCDS25982.1 GeneID:217674 MGI:2156540
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0005179 - hormone activity [Evidence IEA] codon_start : 1 note : glycoprotein hormone beta subunit product : glycoprotein hormone beta 5 protein_id : NP_783575.2

name	Ppp2r5e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859660 CCDS:CCDS25983.1 GeneID:26932 MGI:1349473
definition	GO_component : GO:0005737 - cytoplasm [Evidence TAS]; GO:0000159 - protein phosphatase type 2A complex [Evidence IEA] GO_function : GO:0008601 - protein phosphatase type 2A regulator activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : protein phosphatase 2A subunit beta product : epsilon isoform of regulatory subunit B56, protein phosphatase 2A protein_id : NP_036154.1

name	Wdr89 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263312 GeneID:72338 MGI:1919588
definition	codon_start : 1 product : WD repeat domain 89 isoform 1 protein_id : XP_001476752.1

name	Wdr89 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263314 GeneID:72338 MGI:1919588
definition	codon_start : 1 product : WD repeat domain 89 isoform 2 protein_id : XP_001476767.1

name	Sgpp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13507712 CCDS:CCDS25986.1 GeneID:81535 MGI:2135760
definition	GO_component : GO:0015629 - actin cytoskeleton [Evidence IDA]; GO:0005783 - endoplasmic reticulum [Evidence IDA]; GO:0005794 - Golgi apparatus [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0042392 - sphingosine-1-phosphate phosphatase activity [Evidence IDA] GO_process : GO:0006915 - apoptosis [Evidence IDA]; GO:0006668 - sphinganine-1-phosphate metabolism [Evidence IDA]; GO:0006665 - sphingolipid metabolism [Evidence IDA]; GO:0006670 - sphingosine metabolism [Evidence IDA] codon_start : 1 product : sphingosine-1-phosphate phosphatase 1 protein_id : NP_109675.1

name	Syne2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263317 GeneID:319565 MGI:2449316
definition	codon_start : 1 product : synaptic nuclear envelope 2 protein_id : XP_922176.3

name	Esr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46877094 CCDS:CCDS25987.1 GeneID:13983 MGI:109392
definition	GO_component : GO:0005739 - mitochondrion [Evidence ISS]; GO:0005634 - nucleus [Evidence TAS] [Evidence ISS] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0030284 - estrogen receptor activity [Evidence ISS]; GO:0004879 - ligand-dependent nuclear receptor activity [Evidence IEA]; GO:0008289 - lipid binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0048019 - receptor antagonist activity [Evidence ISS]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0005496 - steroid binding [Evidence IDA] [Evidence ISS]; GO:0003707 - steroid hormone receptor activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007420 - brain development [Evidence IMP]; GO:0030520 - estrogen receptor signaling pathway [Evidence ISS]; GO:0030308 - negative regulation of cell growth [Evidence ISS]; GO:0001764 - neuron migration [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA] [Evidence ISS]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; estrogen receptor beta; ER beta; oestrogen receptor beta product : estrogen receptor beta isoform 2 protein_id : NP_034287.3

name	Esr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46877096 CCDS:CCDS25988.1 GeneID:13983 MGI:109392
definition	GO_component : GO:0005739 - mitochondrion [Evidence ISS]; GO:0005634 - nucleus [Evidence TAS] [Evidence ISS] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0030284 - estrogen receptor activity [Evidence ISS]; GO:0004879 - ligand-dependent nuclear receptor activity [Evidence IEA]; GO:0008289 - lipid binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0048019 - receptor antagonist activity [Evidence ISS]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0005496 - steroid binding [Evidence IDA] [Evidence ISS]; GO:0003707 - steroid hormone receptor activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007420 - brain development [Evidence IMP]; GO:0030520 - estrogen receptor signaling pathway [Evidence ISS]; GO:0030308 - negative regulation of cell growth [Evidence ISS]; GO:0001764 - neuron migration [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA] [Evidence ISS]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; estrogen receptor beta; ER beta; oestrogen receptor beta product : estrogen receptor beta isoform 1 protein_id : NP_997590.1

name	Tex21 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19424116 CCDS:CCDS25989.1 GeneID:80384 MGI:1931131
definition	codon_start : 1 exception : mismatches in translation note : testis expressed gene 11 product : testis expressed gene 21 protein_id : NP_062758.2

name	Mthfd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20270275 CCDS:CCDS25990.1 GeneID:108156 MGI:1342005
definition	GO_function : GO:0004329 - formate-tetrahydrofolate ligase activity [Evidence IEA]; GO:0016155 - formyltetrahydrofolate dehydrogenase activity [Evidence IMP]; GO:0004477 - methenyltetrahydrofolate cyclohydrolase activity [Evidence IEA]; GO:0004488 - methylenetetrahydrofolate dehydrogenase (NADP+) activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006548 - histidine catabolism [Evidence IMP] codon_start : 1 exception : mismatches in translation note : C1-tetrahydrofolate synthase product : methylenetetrahydrofolate dehydrogenase 1 protein_id : NP_620084.1

name	Akap5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82942638 GeneID:238276 MGI:2685104
definition	codon_start : 1 product : similar to A-kinase anchoring protein AKAP150 isoform 1 protein_id : XP_138063.3

name	Zbtb25 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61098362 CCDS:CCDS25991.1 GeneID:109929 MGI:99197
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : zinc finger protein 50 protein_id : NP_082632.1

name	Zbtb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30520189 CCDS:CCDS25992.1 GeneID:268564 MGI:2442326
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : brain specific protein 2 product : zinc finger and BTB domain containing 1 protein_id : NP_848859.1

name	Hspa2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:50345978 CCDS:CCDS25993.1 GeneID:15512 MGI:96243
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]; GO:0006986 - response to unfolded protein [Evidence IEA] codon_start : 1 note : heat shock protein, 70 kDa 2; heat shock 70kDa protein 2 product : heat shock protein 2 protein_id : NP_001002012.1

name	Hspa2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560686 CCDS:CCDS25993.1 GeneID:15512 MGI:96243
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]; GO:0006986 - response to unfolded protein [Evidence IEA] codon_start : 1 note : heat shock protein, 70 kDa 2; heat shock 70kDa protein 2 product : heat shock protein 2 protein_id : NP_032327.2

name	Gm70 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94392975 GeneID:210762 MGI:2684916
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_903922.2

name	LOC100041694 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263325 GeneID:100041694
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477051.1

name	Plekhg3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83165284 CCDS:CCDS25994.1 GeneID:263406 MGI:2388284
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA]; GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA] GO_process : GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation product : pleckstrin homology domain containing, family G (with RhoGef domain) member 3 protein_id : NP_722499.3

name	Spnb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84490394 GeneID:20741 MGI:98387
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0003779 - actin binding [Evidence IEA] GO_process : GO:0051016 - barbed-end actin filament capping [Evidence IEA] codon_start : 1 note : beta-spectrin 1; spectrin R product : spectrin beta 1 protein_id : NP_038703.3

name	Churc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124249115 GeneID:211151 MGI:1923684
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] GO_function : GO:0003677 - DNA binding [Evidence ISS]; GO:0016563 - transcriptional activator activity [Evidence IEA] [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0007498 - mesoderm development [Evidence ISS]; GO:0045941 - positive regulation of transcription [Evidence IEA]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : churchill domain containing 1 protein_id : NP_996257.1

name	Gpx2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:17432429 CCDS:CCDS25996.1 GeneID:14776 MGI:106609
definition	GO_component : GO:0005829 - cytosol [Evidence TAS] GO_function : GO:0004602 - glutathione peroxidase activity [Evidence ISS] [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IEA]; GO:0008430 - selenium binding [Evidence IEA] GO_process : GO:0006979 - response to oxidative stress [Evidence IEA] codon_start : 1 exception : mismatches in translation note : intestinal GPx product : glutathione peroxidase 2 protein_id : NP_109602.1 transl_except : (pos:complement(77896243..77896245),aa:Sec)

name	Rab15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31559981 CCDS:CCDS25997.1 GeneID:104886 MGI:1916865
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008134 - transcription factor binding [Evidence IEA] GO_process : GO:0015031 - protein transport [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : RAB15, member RAS oncogene family protein_id : NP_598811.2

name	Fntb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122343 CCDS:CCDS25998.1 GeneID:110606 MGI:1861305
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0004311 - farnesyltranstransferase activity [Evidence IMP]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004660 - protein farnesyltransferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008285 - negative regulation of cell proliferation [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence IMP]; GO:0048146 - positive regulation of fibroblast proliferation [Evidence IMP]; GO:0042060 - wound healing [Evidence IMP] codon_start : 1 product : farnesyltransferase, CAAX box, beta protein_id : NP_666039.1

name	Max (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678816 GeneID:17187 MGI:96921
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : Max protein protein_id : NP_032584.1

name	LOC665931 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149263315 GeneID:665931
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 1000 ESTs, 9 Proteins product : 60S acidic ribosomal protein P2-like transcript_id : XR_035321.1

name	LOC665957 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149263318 GeneID:665957
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 146 ESTs, 2 Proteins product : similar to high mobility group nucleosomal binding domain 1 pseudo : _no_value transcript_id : XR_032933.1

clone name	MSMg01-046I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-202H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433L17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-428A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-214A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-051D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-201O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-211I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216C20
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-148I22.T7 (MSMg01no148_i22.b1)	MSMg01-148I22.TJ (MSMg01no148_i22.g1)
ACC	AG351516	AG351517
length	780	737
length of high quality (start - end)	194 (38 - 231)	645 (75 - 719)
definition	CHROMAT_FILE: MSMg01no148_i22.b1 PHD_FILE: MSMg01no148_i22.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:11:29 2005	CHROMAT_FILE: MSMg01no148_i22.g1 PHD_FILE: MSMg01no148_i22.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:11:30 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	AGCGCCGCTATACGACTCCTATAGGTCGTGAGTCCGCGGAATTCTGGGGA CTTTTCCCAAGTATATAAGCCAGGCTGGAGAATTGGCTCAGGAGTTAAGA GCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACAT GGTGGCTAAAAACCATCTGTACTGGGATCTGAAGACAGCAACAGTGTGTG TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTTTTTATNTCTCCTCTT TTTACTCTTGTTCCCCTCCTCTTTTTCATCTCTTTCCCCCACCCTCTTTC TCCCTCCCCCTCTTTTTTTTTTTTTTTTCTTTCCTCCCCTTTATACTTCT TTATTTTCTTCTCTCCCCTTCTCTTTTCTTTTCTTTCCGCTTCTCTATTT TTTTCCCCCCCCCCCCTTTGTTTTTTTTTATTATTTATTTCAACCTTTTT TTTTAATTTATTCCTCTTTCTCTTCTCTTTTCTTCTCTCTCTTTCCCTCT TTTTTTTTTTCCTCCCCTTTTTCTCCTCTTCTTTCTCTCTCCTGCTCCTT CCTTTTCTCCTTTCTCTCTTTATTTTCTCCTTCTCTTCTTTTTCTCTATT CTTCTTTTTCCTTCATTTTCTCTTTTCACTTCCCTCTCTCCATTTCTTTC CTTCTCTTTTTACTTTCTTTACTCCTTCTTTTTCCTCCCTCTTCCTTCCT TTCCCTCTTTTTCTCCCTTTTCCTTCCCTCCCTTTTTATCTTCTCCTTTT TTTCCCTTCCCCCTATTTTTTTTCATTCGG	CGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXTTCCGAATTAAGAAGGTTCTCTGACTTCATCTGAATTA CTCCCAGATATCAGATAGGAAATCTTTTTTGTCAGACTGATACCATGATG CTAACTATAGTCTATTCCGTAATAAGCTTTTCATTTTATATACTTCAAAG ATGAAGACACCCCCCAACCCTTCACAGTTAGAGTTGATTCTTAATAAAGA AGTATTGGTTTGGACTAACTGTACTCCTGCTCACCCTTGATTTTCAAAAA CTCTGAACAATCCTCCCTCCTGGCCACTTCTTAACACTGACGTGGAGAGT CAGAGGTAACAAATTGGACAAACACGTTTATGATCCTAAGAGAGTCATGT GTCCTTTCTGTGAGCTCCCCCCTCCGGGCCTAGTTCCCTGATCCCTGTCC CTTTGCTCTGTTAAAACTGAGCTCTTGGCAGCCAACCACTCGGGACTCAC ACTGTGTGGCAAAACCATGTCTGGAGACGTATGTACGGCAGTAAATCTGA ATATTCATTCTTAGCAACCCTTGTAGCTCACTACTCCTCACCAGGCTCGT CAGGGCTTCCTGCCCTGATGCCCCCACTGACGTGACTCCAGTACACACCT GCACGCTAGCCCTGCAGTTTTTAACCAGTCATGTTTAGTGACTCTCCTCT TGGATGAAGTCGCAGCTCTTGAGAATCCGCTGCCTCC
quality values	Open. Hide. 6 6 6 8 6 11 19 12 9 9 15 19 18 20 15 21 8 10 10 22 19 21 9 7 7 7 7 7 6 6 7 7 9 9 22 18 19 11 27 27 33 33 31 31 31 31 31 31 41 39 37 21 19 16 17 9 7 7 6 6 6 10 10 30 30 34 34 37 33 33 36 36 50 50 50 53 50 50 47 43 43 40 40 40 42 42 42 40 47 40 47 47 47 50 50 47 51 68 68 68 68 68 68 68 68 68 57 57 57 54 54 57 57 57 50 47 47 47 47 50 57 68 68 68 68 68 68 68 68 50 50 50 50 50 50 68 50 50 50 68 68 68 68 57 57 57 57 54 54 57 57 68 68 68 68 68 68 68 68 68 57 57 57 48 48 50 51 68 68 68 68 57 57 57 41 41 41 48 48 46 57 57 47 57 57 57 57 47 48 48 48 48 54 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 53 50 50 50 50 50 57 57 57 57 57 57 57 57 36 32 17 15 8 8 15 13 20 20 16 13 14 10 9 9 3 0 3 10 10 10 13 10 10 12 19 22 19 8 8 8 10 10 8 8 6 6 8 8 18 19 24 19 19 10 10 12 15 15 14 14 10 6 6 6 10 10 10 10 10 10 11 19 15 15 11 10 10 8 8 8 8 10 17 12 9 9 9 11 12 19 15 12 12 15 15 8 8 8 9 9 14 27 32 37 23 21 16 10 11 9 15 9 9 8 8 8 8 8 8 11 14 10 14 10 12 13 8 8 8 8 8 10 10 10 12 10 10 6 7 6 6 8 13 10 10 8 8 8 11 13 15 20 19 12 8 8 8 8 8 10 14 13 10 10 13 19 12 12 21 23 13 10 9 9 9 10 12 12 9 8 8 7 7 12 12 17 26 23 19 12 17 16 16 18 19 32 35 30 20 15 15 7 7 6 7 6 8 9 9 12 12 10 8 6 6 6 6 6 8 13 6 6 8 8 10 8 7 7 7 10 13 18 19 19 11 10 10 11 10 10 10 10 15 9 10 10 13 15 17 19 16 15 18 10 11 10 10 10 10 10 8 8 8 12 10 8 8 8 8 8 8 8 8 13 8 8 8 11 8 10 11 12 10 8 8 8 9 13 14 13 12 14 11 11 8 10 8 8 8 8 10 10 10 10 13 10 9 13 10 10 10 12 12 8 8 6 6 7 7 10 10 10 14 10 10 13 13 11 11 11 10 10 10 10 10 10 14 15 18 17 11 11 11 11 17 9 13 8 8 8 8 8 8 8 10 6 6 8 10 10 8 8 15 8 8 8 15 19 13 13 8 8 8 13 10 9 10 10 13 10 10 8 8 8 10 10 10 8 10 8 15 15 15 10 15 19 10 8 6 6 8 10 18 15 9 10 10 13 17 19 12 9 14 13 19 16 25 12 12 6 6 8 8 8 8 8 6 6 10 8 9 9 11 9 13 17 18 8 8 8 10 10 10 11 12 10 9 9 8 8 6 6 13 19 8 8 8 13 10 8 8 8 13 10 10 18 20 11 11 12 11 10 10 12 8 6 6 8 8 6 6 8 8 8 8 11 10 8 8 8 10 11 16 22 20 20 22 15 13 8 10 10 10 12 15 8 13 11 13 9 7 11 8 9 8 8 10 10 10 9 13 9 9 9 10 10 8 8 8 8 8 9 22 22 25 16 9 10 10 10 9 9 10 10 10 8 8 6 6 7 7 14 11 13 12 10 10 8 6 6 6 10 6 6 6	Open. Hide. 6 6 6 11 6 6 8 8 19 19 8 8 10 22 21 24 24 30 37 37 30 30 32 32 28 32 39 37 37 27 18 9 6 6 6 6 7 7 14 12 11 11 12 16 13 10 9 9 10 22 26 44 44 44 39 37 37 33 22 21 11 11 10 14 14 9 9 9 8 8 8 8 8 10 14 23 30 33 33 33 33 53 53 53 53 50 50 35 37 37 37 37 37 53 47 47 47 57 57 50 68 68 68 68 68 68 68 68 68 68 51 50 51 51 50 68 68 68 68 50 68 48 57 57 47 48 54 54 42 48 46 46 46 50 50 50 68 50 50 50 51 68 68 68 68 51 51 50 50 50 51 68 68 68 68 68 68 68 68 68 68 68 68 57 68 68 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 51 51 51 51 68 68 68 68 68 68 57 57 57 57 57 68 68 68 57 57 57 57 59 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 44 44 29 42 32 43 43 43 32 35 32 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 54 54 54 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 57 57 57 57 57 57 59 59 59 59 59 59 59 59 59 59 59 59 59 47 47 47 41 16 9 9 9 9 8 23 11 11 11 24 23 30 37 37 59 59 59 59 59 59 57 57 57 57 57 57 57 57 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 57 57 57 57 57 57 48 59 59 59 59 68 59 59 43 43 40 57 46 48 48 48 59 48 47 44 57 57 57 57 57 57 59 59 59 68 68 68 68 68 57 59 54 54 54 48 48 48 48 48 50 54 54 54 59 59 59 48 48 48 48 48 48 48 48 48 48 57 59 57 57 48 48 59 59 59 59 59 59 41 39 39 39 37 37 44 41 39 39 40 40 40 44 48 48 48 57 57 57 50 50 50 50 53 59 53 50 50 50 50 53 57 57 50 50 50 50 46 46 46 41 37 39 37 32 36 39 39 39 59 47 41 41 39 39 39 39 39 37 39 39 43 41 36 43 30 24 22 31 31 39 39 40 40 41 43 43 43 59 59 47 39 39 36 36 36 39 39 39 43 28 32 19 30 41 32 28 32 32 39 32 36 33 33 33 33 33 33 37 39 39 37 30 25 34 31 19 13 13 13 15 12 15 16 19 32 32 29 25 22 27 22 25 32 37 35 31 27 29 37 37 37 37 23 23 12 12 15 25 24 31 32 30 28 34 20 25 19 19 19 25 26 34 25 28 24 28 23 26 26 15 20 21 20 23 16 17 11 11 13 16 16 22 28 37 39 31 20 25 20 18

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no148_i22.g1 MSMg01no148_i22.g1 CHROMAT_FILE:
MSMg01no148_i22.g1 PHD_FILE: MSMg01no148_i22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:30 2005
         (645 letters)



>mm_chr12_77046808_77047853
          Length = 1046

 Score = 1125 bits (582), Expect = 0.0
 Identities = 630/650 (96%), Gaps = 9/650 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaggttctctgacttcatctgaattactcccagatatcagataggaaatcttttttgtca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 846 aaggttctctgacttcatctgaattactcccagatatcagataggaaatcttttttgtca 787

                                                                       
Query: 61  gactgataccatgatgctaactatagtctattccgtaataagcttttcattttatatact 120
           |||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||
Sbjct: 786 gactgataccatgatgctaagtatagtctatcccataataagcttttcattttatatact 727

                                                                       
Query: 121 tcaaagatgaagacaccccccaacccttcacagt-tagagttgattcttaataaagaagt 179
           | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 726 tgaaagatgaagacaccccccaacccttcacagtgtagagttgattcttaataaagaagt 667

                                                                       
Query: 180 attggtttggactaactgtactcctgctcacccttgattttcaaaaactctgaacaatcc 239
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 666 attggtttggactaactgtactcctgctcacccttgattttcaaaaactctggacaatcc 607

                                                                       
Query: 240 tccctcctggccacttcttaacactgacgtggagagtcagaggtaacaaattggacaaac 299
           ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||
Sbjct: 606 tccctcctggccacttcttaacactgacgtgaagagacagaggtaacaaattggacagac 547

                                                                       
Query: 300 acgtttatgatcctaagagagtcatgtgtcctttctgtgagctccccc----ctccgggc 355
           |||||||||||||||||||||||||||||||||||||||||||    |    ||||||||
Sbjct: 546 acgtttatgatcctaagagagtcatgtgtcctttctgtgagct----cttttctccgggc 491

                                                                       
Query: 356 ctagttccctgatccctgtccctttgctctgttaaaactgagctcttggcagccaaccac 415
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ctagttccctgatccctgtccctttgctctgttaaaactgagctcttggcagccaaccac 431

                                                                       
Query: 416 tcgggactcacactgtgtggcaaaaccatgtctggagacgtatgtacggcagtaaatctg 475
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 430 tcgggactcacactgtgtggcaaaaccatgtctggagacgtatgtacgacagtaaatctg 371

                                                                       
Query: 476 aatattcattcttagcaacccttgtagctcactactcctcaccaggctcgtcagggcttc 535
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aatattcattcttagcaatccttgtagctcactactcctcaccaggctcgtcagggcttc 311

                                                                       
Query: 536 ctgccctgatgcccccactgacgtgactccagtacacacctgcacgctagccctgcagtt 595
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ctgccccgatgcccccactgacgtgactccagtacacacctgcacgctagccctgcagtt 251

                                                             
Query: 596 tttaaccagtcatgtttagtgactctcctcttggatgaagtcgcagctct 645
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tttaaccagtcatgtttagtgactctcctcttggatgaagtcgcagctct 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1046
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1036
Effective search space:   657860
Effective search space used:   657860
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information