Query= MSMg01no149_f07.b1 MSMg01no149_f07.b1 CHROMAT_FILE:
MSMg01no149_f07.b1 PHD_FILE: MSMg01no149_f07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:33 2005
(455 letters)
>mm_chr12_86101682_86102535
Length = 854
Score = 745 bits (385), Expect = 0.0
Identities = 436/453 (96%), Gaps = 5/453 (1%)
Strand = Plus / Plus
Query: 5 gaattctaagtcaa-tccctcaaatacatcatcaaatgctggaatggtgactccagaaga 63
|||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctaagtcaagtcg-tcaaatacatcatcaaatgctggaatggtgactccagaaga 263
Query: 64 tcagg-gagtcccgaactgtggggtctccatccctatgagtcacattcaatacctagcct 122
||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tcaggtg-gtcccgaactatggggtctccatccctatgagtcacattcaatacctagccc 322
Query: 123 tgtcacatgatgaaggaagctggtctcttcccttgctctccatcaagggaatcaggctac 182
|||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 323 tgtcacgtgatgaaggaagctggtatctttccttgctctccatcaagggaatcaggctac 382
Query: 183 tgggacagataaccttatctctctcccaggaccactgactcctgtcactgagttttaaat 242
|||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 383 tgggacagataaccttatctctctcccaggaccactgacttctgtcattgagttttaaat 442
Query: 243 accacagtctagcacagcagtggcaggtaatccttcagatgccgtggaagattaaaaagg 302
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 443 accacagtctagcacagcagtggcaggtaatccttcagatgccatggaagattaaaaag- 501
Query: 303 aagttcatttctctagcccctacactgcaagataagcagaagggatgaaagtattattac 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 aagttcatttctctagcccctacactgcaagataagcagaagggatgaaagtattattac 561
Query: 363 caccgtgtgcctccctctgactatcaggctatggaaacaatgtaccccaagaaattggag 422
||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 562 caccgcgtgcctccctctgactatcaggctatgaaaacaatgtaccccaagaaattggaa 621
Query: 423 ttccccactggaagaagggaaaagctgagccct 455
|||||||||||||||||||||||||||||||||
Sbjct: 622 ttccccactggaagaagggaaaagctgagccct 654
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 854
Length adjustment: 10
Effective length of query: 445
Effective length of database: 844
Effective search space: 375580
Effective search space used: 375580
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no149_f07.g1 MSMg01no149_f07.g1 CHROMAT_FILE:
MSMg01no149_f07.g1 PHD_FILE: MSMg01no149_f07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:33 2005
(482 letters)
>mm_chr12_86254754_86255636
Length = 883
Score = 864 bits (447), Expect = 0.0
Identities = 474/483 (98%), Gaps = 1/483 (0%)
Strand = Plus / Minus
Query: 1 tattgtcttggcatctaagttttgtcttctagacagcctctcacaccaggaaccagcaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 tattgtcttggcatctaagttttgtcttctagacagcctctcacaccaggaaccagcaca 624
Query: 61 agtctttcttgtcagactgtatcttgagttttggtttt-aaaatgacactatggatcagc 119
|||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||
Sbjct: 623 agtctttcttgtcagactgtatcttgagttttggttttaaaaatgtcactgtggatcagc 564
Query: 120 tatggggagacaaaaggaaacaaaactccagccctgacttttggggtgagcctgggctta 179
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 563 tatggggagacaaaaggaaacaaaactccagccctgacttttggggtgaacctgggctta 504
Query: 180 ggggcttggtgcagtgaggacagggggccaaaatagtggttggcacaaggacatggagaa 239
| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 503 gaggcttggtgcagtgaggacagggggccaagatagtggttggcacaaggacatggagaa 444
Query: 240 ctctggaagcagagccagaacctccaaggactggggcccagggaagcctggcacagggaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ctctggaagcagagccagaacctccaaggactggggcccagggaagcctggcacagggaa 384
Query: 300 aagctgggtatttaaccaggaacactcactcattttccctcggccttggcagtaggtcag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 aagctgggtatttaaccaggaacactcactcattttccctcggccttggcagtaggtcag 324
Query: 360 agcaagcagttctagaagggtccacatcttttctattgtccccaccccagcttcaatcat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 323 agcaagcagttctagaagggtccacatcttttctattgtccccaccccagcttcagtcat 264
Query: 420 catcccgaacatctgcttcaaatttgagcccttgccttctctgcctgattgcatactaaa 479
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 catcccaaacatctgtttcaaatttgagcccttgccttctctgcctgattgcatactaaa 204
Query: 480 cca 482
|||
Sbjct: 203 cca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 883
Length adjustment: 10
Effective length of query: 472
Effective length of database: 873
Effective search space: 412056
Effective search space used: 412056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
