Query= MSMg01no152_p15.b1 MSMg01no152_p15.b1 CHROMAT_FILE:
MSMg01no152_p15.b1 PHD_FILE: MSMg01no152_p15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:14 2005
(506 letters)
>mm_chr12_31684834_31685739
Length = 906
Score = 934 bits (483), Expect = 0.0
Identities = 498/503 (99%), Gaps = 1/503 (0%)
Strand = Plus / Minus
Query: 1 cattggggtcaccaatggagactgactataaactctgtagttaatgtttccacaagaata 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 703 cattggggtcaccaatggagactgactataaactctgtagctaatgtttccacaagaata 644
Query: 61 agaacatacagtaataattccacctggaaagagtgtgaattcaaaatcttgtgccctctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 agaacatacagtaataattccacctggaaagagtgtgaattcaaaatcttgtgccctctg 584
Query: 121 ttgtgtctgtctgattttagagaaagtataagtcacatgggaagaggggccaagcctttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 ttgtgtctgtctgattttagagaaagtataagtcacatgggaagaggggccaagcctttc 524
Query: 181 tgcatggtctttctgcatggggagggagaaggttccaagaacagacaagagaacacacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 tgcatggtctttctgcatggggagggagaaggttccaagaacagacaagagaacacacca 464
Query: 241 accagcacctgatagcttaggaatcccggtactagggatgaggtttgctactgtgagatg 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 accagcacctgaaagcttaggaatcccggtactagggatgaggtttgctactgtgagatg 404
Query: 301 ccatgatctagactctataaacacgtcacactgagcagacttcagccaatgccacacagt 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ccatgatctagactctataaacacgtcacactgagcagacttcagccaatgccacacagc 344
Query: 361 tcatgctgtttctaagtttctgtttctgaagttctttgagaaaacttgcctacaggcatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 tcatgctgtttctaagtttctgtttctgaagttctttgagaaaacttgcctacaggcatg 284
Query: 421 accacccagaaggccaggcctgcaaatatctgcaccaccaccttgctcttaaaaccgtgt 480
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 283 accacccagaaggccaggcctgcaaatatctgcaccaccacctcgctcttaaaaccgtgt 224
Query: 481 ttagattttatagactttttttt 503
|||||||||||||| ||||||||
Sbjct: 223 ttagattttataga-tttttttt 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 906
Length adjustment: 10
Effective length of query: 496
Effective length of database: 896
Effective search space: 444416
Effective search space used: 444416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no152_p15.g1 MSMg01no152_p15.g1 CHROMAT_FILE:
MSMg01no152_p15.g1 PHD_FILE: MSMg01no152_p15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:14 2005
(451 letters)
>mm_chr12_31497965_31498815
Length = 851
Score = 857 bits (443), Expect = 0.0
Identities = 449/451 (99%)
Strand = Plus / Plus
Query: 1 ttaggatatatctgtatgaagtggcattggaaagtgaaaatcttgactgcaatcatcttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttaggatatatctgtatgaagtggcattggaaagtgaaaatcttgactgcaatcatcttc 260
Query: 61 tttgctaaatggtgcaatttcttagtttttcaaaaggtatatggaagctgggcatggtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttgctaaatggtgcaatttcttagtttttcaaaaggtatatggaagctgggcatggtgg 320
Query: 121 tgcatgcctttaatcccagcacttaggaggcagaggcaggctgatttctgagttcaaggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcatgcctttaatcccagcacttaggaggcagaggcaggctgatttctgagttcaaggc 380
Query: 181 cagcctggtctacagagtgagttccaggacagccagggctacacagagaaaccctgtctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagcctggtctacagagtgagttccaggacagccagggctacacagagaaaccctgtctt 440
Query: 241 gaaaaaccatataaataaaaataaataaaaaaggtatatggaggcttcacactcaagtgg 300
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaaaaaccaaaaaaataaaaataaataaaaaaggtatatggaggcttcacactcaagtgg 500
Query: 301 ggatggatatacaggcagcttcttgtaggaacagagttctctgccattgagtgcagtagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggatggatatacaggcagcttcttgtaggaacagagttctctgccattgagtgcagtagg 560
Query: 361 tcatgagtcagctgatgcagacaagggactttttatgtgctttttgttatcttcctcagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcatgagtcagctgatgcagacaagggactttttatgtgctttttgttatcttcctcagt 620
Query: 421 gtatgcacatcttagcacaatgtatttagca 451
|||||||||||||||||||||||||||||||
Sbjct: 621 gtatgcacatcttagcacaatgtatttagca 651
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space: 370881
Effective search space used: 370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
