CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCATCTGGAGACCCTCCCTTTCCTTTGAACCATCTTGAAAATCTAT
TACCAGAATTAGAGTCCCCACAGTAAGTATGCAAATAACAAAACATACTG
AATGTTTAAATATCAGCAACTTTCTCATTCCCCCTACACACTTGAGCACA
CACACACACACACACACACACACACACACACACACAGAGGTTATAAAATA
TTTCACAAATATCCAAAAGGAAAATTTAAATAGTAAATAGCCAATAAACA
CCTTAAGCATATCAGAATGGGTCACGCTTTACTGAAGCCTCATCTCATTG
TTCCTATAAACAAAGTTGCACACAATAAGAGATATTATAGGCTGCAGCAT
AAAATTTTTTAAAAACCCAAAATATTATTAAATGTCTCCATATCAAATCC
TAATAAAAGTCACAAGACATCAAAAGTCAAACTTCAACAAACATTACATG
CATCATGACACATGAAACATTTTTAAAACCCTCTGAATCCCCCGTAAGAG
GTTTATTTTAAACCTGCAGATTTCTTAACTGAGACATACACACCTAATGT
TCTGTGTTGTGAACAAGGAGGGAAGAAGACGCCTGCACTTAAATCTTGAA
GCATCCCGTCCTGATGAGCCGAGAGAAACTAATTTCTGCCATCAGAAAAG
TCAGTCAGCAGAGAACCAAACAATCACATGCGCTGCTCTG

TCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXAAGACCCATACTTAAACATAATA
AAAGCAATTTCCTGCAAACCAACAGCCAATATAAAATTAAACTGAAAGAC
ACTTGAAGCAATCCAACTAAAATCAGGGAAAGAACAAGGATGTTCATTCT
CCCCATATCTATTCAATATAGTACTCAAAGTGCTAGCTAGAACAATAAGA
CAGAAAAAAAAGAGAGAGAGATCCAGGAAATACAAATTGACAAAGAAGAA
ATAAAGGTATCACTGTTTGCAGATGATATTATAGCATACATAAGCGACTC
CAAAAATTCTACAAGAGAATTTCTTCAGCTGATGAACAATTTTGGCAAAG
TGGCTGGATATAAAATTAACTCAAATAAATTAGTAGCCTTCCTTTATATG
AATGACAAACAGACTGAGGAAGAAATTAGGGGAAAAACTCCTTTCATAAT
AGCCACAAATAGCATAAAATATCTTGGGATAACTCTAACCACTCAGGTAA
AAGATCTGTATGACAATAACTTTAAGTCTCTAAAGAAAGAAATTGAAGAA
GATCTCATAATATGGAGAGATCTCCCATGCTCATGGATTGGCAGATTTAA
CAGTAAAAATGGCCATCCTACTAAAGGTAATCTAGAGATCCTATGAAACC
CCCATCATAATCCCAACACAAATCTTCAAAGAG

Query= MSMg01no155_g13.b1 MSMg01no155_g13.b1 CHROMAT_FILE:
MSMg01no155_g13.b1 PHD_FILE: MSMg01no155_g13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:19 2005
         (643 letters)



>mm_chr12_39509904_39510945
          Length = 1042

 Score = 1185 bits (613), Expect = 0.0
 Identities = 629/635 (99%), Gaps = 4/635 (0%)
 Strand = Plus / Minus

                                                                        
Query: 9    tccatctggagaccctccctttcctttgaaccatcttgaaaatctattaccagaattaga 68
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1022 tccatctggagaccctccctttcctttgaaccatcttgaaaatctattaccagaattaga 963

                                                                        
Query: 69   gtccccacagtaagtatgcaaataacaaaacatactgaatgtttaaatatcagcaacttt 128
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962  gtccccacagtaagtatgcaaataacaaaacatactgaatgtttaaatatcagcaacttt 903

                                                                        
Query: 129  ctcattccccctacacacttgagcacacacacacacacacacacacacacacacacacac 188
            |||||| |||||||||||| |||  |||||||||||||||||||||||||||||||||||
Sbjct: 902  ctcatt-cccctacacactcgag--cacacacacacacacacacacacacacacacacac 846

                                                                        
Query: 189  acagaggttataaaatatttcacaaatatccaaaaggaaaatttaaatagtaaatagcca 248
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 845  acagaggttataaaatatttcacaaatatccagaaggaaaatttaaatagtaaatagcca 786

                                                                        
Query: 249  ataaacaccttaagcatatcagaatgggtcacgctttactgaagcctcatctcattgttc 308
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785  ataaacaccttaagcatatcagaatgggtcacgctttactgaagcctcatctcattgttc 726

                                                                        
Query: 309  ctataaacaaagttgcacacaataagagatattataggctgcagcataaaattttttaaa 368
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725  ctataaacaaagttgcacacaataagagatattataggctgcagcataaaattttttaaa 666

                                                                        
Query: 369  aacccaaaatattattaaatgtctccatatcaaatcctaataaaagtcacaagacatcaa 428
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665  aacccaaaatattattaaatgtctccatatcaaatcctaataaaagtcacaagacatcaa 606

                                                                        
Query: 429  aagtcaaacttcaacaaacattacatgcatcatgacacatgaaacatttttaaaaccctc 488
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605  aagtcaaacttcaacaaacattacatgcatcatgacacatgaaacatttttaaaaccctc 546

                                                                        
Query: 489  tgaatcccccgtaagaggtttattttaaacctgcagatttcttaactgagacatacacac 548
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545  tgaat-ccccgtaagaggtttattttaaacctgcagatttcttaactgagacatacacac 487

                                                                        
Query: 549  ctaatgttctgtgttgtgaacaaggagggaagaagacgcctgcacttaaatcttgaagca 608
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486  ctaatgttctgtgttgtgaacaaggagggaagaagacgcctgcacttaaatcttgaagca 427

                                               
Query: 609  tcccgtcctgatgagccgagagaaactaatttctg 643
            |||||||||||||||||||||||||||||||||||
Sbjct: 426  tcccgtcctgatgagccgagagaaactaatttctg 392


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 14
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1042
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1032
Effective search space:   653256
Effective search space used:   653256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)